Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016425.1_202016-02-08] 598 sequences; 9,476,861 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq56 223 6e-56 seq174 221 2e-55 >seq56 Length=4035 Score = 223 bits (246), Expect = 6e-56 Identities = 199/244 (82%), Gaps = 13/244 (5%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAA 134 ||||||||| |||||||||||||||| |||| || ||||| |||||||||||| Sbjct 1277 TTACTTTGAGGAAATTAGAGTGTTCAAGGCAGTAGTT-----GAATATATTAGCATGGAA 1331 Query 135 TAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAAT 194 ||| |||| |||| | ||||||| |||||||||| || |||| ||||||||||| Sbjct 1332 TAACAGAAGAGGA--TACGGTTCT--TTTGTTGGTTCG--GGGCCGC-GTAATGATTAAC 1384 Query 195 AGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAA 254 ||||| |||||||| ||||||||| |||||||||||||||||||||| || Sbjct 1385 AGGGACGGTCGGGGGCGTCAGTATTGGGGCGTCAGAGGTGAAATTCTTGGATCGCCCCAA 1444 Query 255 GACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTA 314 ||||||||||||||||||| ||| ||||||| |||||||||||||| |||||||||||| Sbjct 1445 GACTAACTACTGCGAAAGCATTCGCCAAGGACGTTTTCATTAATCA-AGAACGAAAGTTA 1503 Query 315 GGGG 318 |||| Sbjct 1504 GGGG 1507 >seq174 Length=343 Score = 221 bits (244), Expect = 2e-55 Identities = 198/243 (81%), Gaps = 13/243 (5%) Strand=Plus/Minus Query 76 TACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAAT 135 |||||||| |||||||||||||||| |||| || ||||| ||||||||||||| Sbjct 343 TACTTTGAGGAAATTAGAGTGTTCAAGGCAGTAGTT-----GAATATATTAGCATGGAAT 289 Query 136 AATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATA 195 || |||| |||| | ||||||| |||||||||| || |||| ||||||||||| | Sbjct 288 AACAGAAGAGGA--TACGGTTCT--TTTGTTGGTTCG--GGGCCGC-GTAATGATTAACA 236 Query 196 GGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAG 255 |||| |||||||| ||||||||| |||||||||||||||||||||| ||| Sbjct 235 GGGACGGTCGGGGGCGTCAGTATTGGGGCGTCAGAGGTGAAATTCTTGGATCGCCCCAAG 176 Query 256 ACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAG 315 |||||||||||||||||| ||| ||||||| |||||||||||||| ||||||||||||| Sbjct 175 ACTAACTACTGCGAAAGCATTCGCCAAGGACGTTTTCATTAATCA-AGAACGAAAGTTAG 117 Query 316 GGG 318 ||| Sbjct 116 GGG 114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915194527104