Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016425.1_202016-02-08] 598 sequences; 9,476,861 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq56 116 4e-24 seq174 114 1e-23 >seq56 Length=4035 Score = 116 bits (128), Expect = 4e-24 Identities = 132/173 (76%), Gaps = 13/173 (8%) Strand=Plus/Plus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCATGGAA 73 ||||||||| ||||||||| |||||| |||| || ||||| |||| ||||||| Sbjct 1277 TTACTTTGAGGAAATTAGAGTGTTCAAGGCAGTAGTT-----GAATATATTAGCATGGAA 1331 Query 74 TAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAA 133 ||| |||| |||| | ||||||| ||||| |||| || |||| |||||||| || Sbjct 1332 TAACAGAAGAGGA--TACGGTTCT--TTTGTTGGTTCG--GGGCCGC--GTAATGATTAA 1383 Query 134 TACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 | ||| |||||||| ||||||||| |||| ||||||||||||||||| Sbjct 1384 CAGGGACGGTCGGGGGCGTCAGTATTGGGGCGTCAGAGGTGAAATTCTTGGAT 1436 >seq174 Length=343 Score = 114 bits (126), Expect = 1e-23 Identities = 131/172 (76%), Gaps = 13/172 (8%) Strand=Plus/Minus Query 15 TACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCATGGAAT 74 |||||||| ||||||||| |||||| |||| || ||||| |||| |||||||| Sbjct 343 TACTTTGAGGAAATTAGAGTGTTCAAGGCAGTAGTT-----GAATATATTAGCATGGAAT 289 Query 75 AATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAAT 134 || |||| |||| | ||||||| ||||| |||| || |||| |||||||| || Sbjct 288 AACAGAAGAGGA--TACGGTTCT--TTTGTTGGTTCG--GGGCCGC--GTAATGATTAAC 237 Query 135 ACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 | ||| |||||||| ||||||||| |||| ||||||||||||||||| Sbjct 236 AGGGACGGTCGGGGGCGTCAGTATTGGGGCGTCAGAGGTGAAATTCTTGGAT 185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511997033920