Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016425.1_202016-02-08]
598 sequences; 9,476,861 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq56 116 4e-24
seq174 114 1e-23
>seq56
Length=4035
Score = 116 bits (128), Expect = 4e-24
Identities = 132/173 (76%), Gaps = 13/173 (8%)
Strand=Plus/Plus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCATGGAA 73
||||||||| ||||||||| |||||| |||| || ||||| |||| |||||||
Sbjct 1277 TTACTTTGAGGAAATTAGAGTGTTCAAGGCAGTAGTT-----GAATATATTAGCATGGAA 1331
Query 74 TAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAA 133
||| |||| |||| | ||||||| ||||| |||| || |||| |||||||| ||
Sbjct 1332 TAACAGAAGAGGA--TACGGTTCT--TTTGTTGGTTCG--GGGCCGC--GTAATGATTAA 1383
Query 134 TACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186
| ||| |||||||| ||||||||| |||| |||||||||||||||||
Sbjct 1384 CAGGGACGGTCGGGGGCGTCAGTATTGGGGCGTCAGAGGTGAAATTCTTGGAT 1436
>seq174
Length=343
Score = 114 bits (126), Expect = 1e-23
Identities = 131/172 (76%), Gaps = 13/172 (8%)
Strand=Plus/Minus
Query 15 TACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCATGGAAT 74
|||||||| ||||||||| |||||| |||| || ||||| |||| ||||||||
Sbjct 343 TACTTTGAGGAAATTAGAGTGTTCAAGGCAGTAGTT-----GAATATATTAGCATGGAAT 289
Query 75 AATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAAT 134
|| |||| |||| | ||||||| ||||| |||| || |||| |||||||| ||
Sbjct 288 AACAGAAGAGGA--TACGGTTCT--TTTGTTGGTTCG--GGGCCGC--GTAATGATTAAC 237
Query 135 ACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186
| ||| |||||||| ||||||||| |||| |||||||||||||||||
Sbjct 236 AGGGACGGTCGGGGGCGTCAGTATTGGGGCGTCAGAGGTGAAATTCTTGGAT 185
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511997033920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |