Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016425.1_202016-02-08] 598 sequences; 9,476,861 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq89 280 4e-73 seq135 149 2e-33 seq595 138 3e-30 seq492 125 2e-26 >seq89 Length=507 Score = 280 bits (310), Expect = 4e-73 Identities = 205/236 (87%), Gaps = 3/236 (1%) Strand=Plus/Plus Query 258 TCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGC 317 |||| |||||||||||||||||||| | ||||| |||| |||||||| ||||||||| || Sbjct 1 TCCAGACTCCTACGGGAGGCAGCAGCGAGGAATCTTGCGCAATGGGCGAAAGCCTGACGC 60 Query 318 AGCAACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGAT 377 ||||||||||||||||||| ||||||||||||||||||||||||| | || |||||| Sbjct 61 AGCAACGCCGCGTGAGCGAAGAAGGCCTTCGGGTCGTAAAGCTCTTTTGTCGGGGAAGAA 120 Query 378 AA--TGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATA 435 | ||||||||| | || ||||| |||||||||||||||||||||||||||||||| Sbjct 121 GATCTGACGGTACCCGGCGAATAAGCCACGGCTAACTACGTGCCAGCAGCCGCGGTAATA 180 Query 436 CGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTT 491 |||||| ||| ||||||||||||||||||| ||| |||||| || |||||| |||| Sbjct 181 CGTAGGTGGCAAGCGTTATCCGGAATTACT-GGGTGTAAAGCGTACGTAGGCGGTT 235 >seq135 Length=407 Score = 149 bits (164), Expect = 2e-33 Identities = 112/129 (87%), Gaps = 2/129 (2%) Strand=Plus/Plus Query 372 GAAGATAATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGT 431 |||||| ||||||||| | || ||||| |||||||||||||||||||||||||||| Sbjct 18 GAAGATC-TGACGGTACCCGGTGAATAAGCCACGGCTAACTACGTGCCAGCAGCCGCGGT 76 Query 432 AATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTT 491 |||||||||| ||| ||||||||||||||||||| |||||||||| || |||||| |||| Sbjct 77 AATACGTAGGTGGCAAGCGTTATCCGGAATTACT-GGGCGTAAAGCGTACGTAGGCGGTT 135 Query 492 TCTTAAGTC 500 | |||||| Sbjct 136 TGGTAAGTC 144 >seq595 Length=100 Score = 138 bits (152), Expect = 3e-30 Identities = 90/99 (91%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 259 CCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCA 318 ||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||| Sbjct 2 CCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGCGAAAGCCTGACGCA 61 Query 319 GCAACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAA 357 |||| |||||||| | || |||||||||||||| ||||| Sbjct 62 GCAATGCCGCGTGTGTGAAGAAGGCCTTCGGGTTGTAAA 100 >seq492 Length=180 Score = 125 bits (138), Expect = 2e-26 Identities = 102/121 (84%), Gaps = 2/121 (2%) Strand=Plus/Plus Query 380 TGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTA 439 ||||| ||| | || ||||| |||||||||| |||||||||||||||||||||||| | Sbjct 48 TGACGTTACCTACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGA 107 Query 440 GGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 499 ||| || ||||||| |||||||||| |||||||||| | ||||||| ||||| ||||| Sbjct 108 GGGTGCAAGCGTTAATCGGAATTACT-GGGCGTAAAGCGCGCGTAGGCGGTTT-GTAAGT 165 Query 500 C 500 | Sbjct 166 C 166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497591044352