Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016425.1_202016-02-08] 598 sequences; 9,476,861 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq78 250 5e-64 seq56 250 5e-64 seq76 100 5e-19 >seq78 Length=557 Score = 250 bits (276), Expect = 5e-64 Identities = 211/257 (82%), Gaps = 13/257 (5%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 ||||||||| |||| | ||| |||||| ||||| ||||||||||||||||||||| Sbjct 408 CTTCTTAGAAGGACAACTGGCGCAAGCCAGCGGAAGC--GAGGCAATAACAGGTCTGTGA 351 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 |||||||||| ||||||||||||||||||||||||||||| ||| || ||||| | Sbjct 350 TGCCCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGGCAGCGAGT------C 297 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 |||| | | | | | ||| |||| ||| |||| |||||||||||||||| || |||| Sbjct 296 CTTGCCAGAGATGGCCGGGGAATC---TTAGACTCCGTCGTGCTGGGGATAGCGCTTTGC 240 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 || || |||||||||||||| ||||||||||||| ||||||||| |||| |||||| Sbjct 239 AA--GAGGCGCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGCTGATTA 182 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||||||||||| Sbjct 181 CGTCCCTGCCCTTTGTA 165 >seq56 Length=4035 Score = 250 bits (276), Expect = 5e-64 Identities = 211/257 (82%), Gaps = 13/257 (5%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 ||||||||| |||| | ||| |||||| ||||| ||||||||||||||||||||| Sbjct 1882 CTTCTTAGAAGGACAACTGGCGCAAGCCAGCGGAAGC--GAGGCAATAACAGGTCTGTGA 1939 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 |||||||||| ||||||||||||||||||||||||||||| ||| || ||||| | Sbjct 1940 TGCCCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGGCAGCGAGT------C 1993 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 |||| | | | | | ||| |||| ||| |||| |||||||||||||||| || |||| Sbjct 1994 CTTGCCAGAGATGGCCGGGGAATC---TTAGACTCCGTCGTGCTGGGGATAGCGCTTTGC 2050 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 || || |||||||||||||| ||||||||||||| ||||||||| |||| |||||| Sbjct 2051 AA--GAGGCGCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGCTGATTA 2108 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||||||||||| Sbjct 2109 CGTCCCTGCCCTTTGTA 2125 >seq76 Length=686 Score = 100 bits (110), Expect = 5e-19 Identities = 61/65 (94%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 264 TCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCT 323 |||||||||||| ||||||||||||| ||||||||| |||| |||||||||||||||||| Sbjct 686 TCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGCTGATTACGTCCCTGCCCT 627 Query 324 TTGTA 328 ||||| Sbjct 626 TTGTA 622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947194335744