Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016425.1_202016-02-08]
598 sequences; 9,476,861 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq78 250 5e-64
seq56 250 5e-64
seq76 100 5e-19
>seq78
Length=557
Score = 250 bits (276), Expect = 5e-64
Identities = 211/257 (82%), Gaps = 13/257 (5%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131
||||||||| |||| | ||| |||||| ||||| |||||||||||||||||||||
Sbjct 408 CTTCTTAGAAGGACAACTGGCGCAAGCCAGCGGAAGC--GAGGCAATAACAGGTCTGTGA 351
Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191
|||||||||| ||||||||||||||||||||||||||||| ||| || ||||| |
Sbjct 350 TGCCCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGGCAGCGAGT------C 297
Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251
|||| | | | | | ||| |||| ||| |||| |||||||||||||||| || ||||
Sbjct 296 CTTGCCAGAGATGGCCGGGGAATC---TTAGACTCCGTCGTGCTGGGGATAGCGCTTTGC 240
Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311
|| || |||||||||||||| ||||||||||||| ||||||||| |||| ||||||
Sbjct 239 AA--GAGGCGCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGCTGATTA 182
Query 312 CGTCCCTGCCCTTTGTA 328
|||||||||||||||||
Sbjct 181 CGTCCCTGCCCTTTGTA 165
>seq56
Length=4035
Score = 250 bits (276), Expect = 5e-64
Identities = 211/257 (82%), Gaps = 13/257 (5%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131
||||||||| |||| | ||| |||||| ||||| |||||||||||||||||||||
Sbjct 1882 CTTCTTAGAAGGACAACTGGCGCAAGCCAGCGGAAGC--GAGGCAATAACAGGTCTGTGA 1939
Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191
|||||||||| ||||||||||||||||||||||||||||| ||| || ||||| |
Sbjct 1940 TGCCCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGGCAGCGAGT------C 1993
Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251
|||| | | | | | ||| |||| ||| |||| |||||||||||||||| || ||||
Sbjct 1994 CTTGCCAGAGATGGCCGGGGAATC---TTAGACTCCGTCGTGCTGGGGATAGCGCTTTGC 2050
Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311
|| || |||||||||||||| ||||||||||||| ||||||||| |||| ||||||
Sbjct 2051 AA--GAGGCGCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGCTGATTA 2108
Query 312 CGTCCCTGCCCTTTGTA 328
|||||||||||||||||
Sbjct 2109 CGTCCCTGCCCTTTGTA 2125
>seq76
Length=686
Score = 100 bits (110), Expect = 5e-19
Identities = 61/65 (94%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 264 TCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCT 323
|||||||||||| ||||||||||||| ||||||||| |||| ||||||||||||||||||
Sbjct 686 TCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGCTGATTACGTCCCTGCCCT 627
Query 324 TTGTA 328
|||||
Sbjct 626 TTGTA 622
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947194335744
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |