Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016425.1_202016-02-08]
598 sequences; 9,476,861 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq57 443 7e-122
seq171 414 3e-113
seq147 403 6e-110
seq183 291 3e-76
seq192 138 4e-30
seq139 138 4e-30
>seq57
Length=1263
Score = 443 bits (490), Expect = 7e-122
Identities = 297/327 (91%), Gaps = 7/327 (2%)
Strand=Plus/Minus
Query 198 AACGATAAGGGTAGTGGTATTTCACTTGCGCCG---AAACGGCTCCCACTTATTCTACAC 254
||| ||| |||| | |||||||||| |||||| ||||||||||| | ||| ||||||
Sbjct 538 AACTATAGGGGTGGGGGTATTTCACGGGCGCCGCCGAAACGGCTCCCCCCTATACTACAC 479
Query 255 CTCTCAAGTCATTTCACAAAGTCGGA-CTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCC 313
| | || || | | || | | | |||||||||||||||||||||||||||||||||
Sbjct 478 CCCCCATGT--TCCCCCACGGCCCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCC 421
Query 314 GCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAG 373
||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 GCTGACGC-GCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAG 362
Query 374 TGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTAC 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 TGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTAC 302
Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 301 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGATGAATTTCTTCACTTT 242
Query 494 GACATTCAGAGCACTGGGCAGAAATCA 520
|||||||||||||||||||||||||||
Sbjct 241 GACATTCAGAGCACTGGGCAGAAATCA 215
Score = 138 bits (152), Expect = 4e-30
Identities = 90/99 (91%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||||||||| | | ||||||||||||| |||||| ||||||| ||||| ||||||||||
Sbjct 662 CTTTTGCTCGGCTGAAGATTTCTGTTCTTCATGAGCCCCCCTTGGGACATCTGCGTTATG 603
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTG 105
|||||||||||||||||||||||||||||||||| ||||
Sbjct 602 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCGCCTG 564
>seq171
Length=346
Score = 414 bits (458), Expect = 3e-113
Identities = 237/241 (98%), Gaps = 1/241 (0%)
Strand=Plus/Plus
Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTT 339
||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct 39 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGACGC-GCCAAGCCCGTTCCCTT 97
Query 340 GGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGC 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 98 GGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGC 157
Query 400 GCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGC 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 158 GCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGC 217
Query 460 CGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATC 519
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 218 CGTTTACCCGCGCTTGGATGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATC 277
Query 520 A 520
|
Sbjct 278 A 278
>seq147
Length=382
Score = 403 bits (446), Expect = 6e-110
Identities = 275/305 (90%), Gaps = 7/305 (2%)
Strand=Plus/Plus
Query 198 AACGATAAGGGTAGTGGTATTTCACTTGCGCCG---AAACGGCTCCCACTTATTCTACAC 254
||| ||| |||| | |||||||||| |||||| ||||||||||| | ||| ||||||
Sbjct 81 AACTATAGGGGTGGGGGTATTTCACGGGCGCCGCCGAAACGGCTCCCCCCTATACTACAC 140
Query 255 CTCTCAAGTCATTTCACAAAGTCGGA-CTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCC 313
| | || || | | || | | | |||||||||||||||||||||||||||||||||
Sbjct 141 CCCCCATGT--TCCCCCACGGCCCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCC 198
Query 314 GCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAG 373
||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 199 GCTGACGC-GCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAG 257
Query 374 TGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTAC 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 258 TGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTAC 317
Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 318 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGATGAATTTCTTCACTTT 377
Query 494 GACAT 498
|||||
Sbjct 378 GACAT 382
Score = 91.5 bits (100), Expect = 5e-16
Identities = 53/55 (96%), Gaps = 0/55 (0%)
Strand=Plus/Plus
Query 51 GGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTG 105
||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1 GGACATCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCGCCTG 55
>seq183
Length=339
Score = 291 bits (322), Expect = 3e-76
Identities = 163/164 (99%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 60
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 120
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 ATGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 164
>seq192
Length=316
Score = 138 bits (152), Expect = 4e-30
Identities = 90/99 (91%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||||||||| | | ||||||||||||| |||||| ||||||| ||||| ||||||||||
Sbjct 50 CTTTTGCTCGGCTGAAGATTTCTGTTCTTCATGAGCCCCCCTTGGGACATCTGCGTTATG 109
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTG 105
|||||||||||||||||||||||||||||||||| ||||
Sbjct 110 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCGCCTG 148
Score = 122 bits (134), Expect = 3e-25
Identities = 117/146 (80%), Gaps = 7/146 (5%)
Strand=Plus/Plus
Query 198 AACGATAAGGGTAGTGGTATTTCACTTGCGCCG---AAACGGCTCCCACTTATTCTACAC 254
||| ||| |||| | |||||||||| |||||| ||||||||||| | ||| ||||||
Sbjct 174 AACTATAGGGGTGGGGGTATTTCACGGGCGCCGCCGAAACGGCTCCCCCCTATACTACAC 233
Query 255 CTCTCAAGTCATTTCACAAAGTCGGA-CTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCC 313
| | || || | | || | | | |||||||||||||||||||||||||||||||||
Sbjct 234 CCCCCATGT--TCCCCCACGGCCCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCC 291
Query 314 GCTGATTCCGCCAAGCCCGTTCCCTT 339
||||| ||||||||||||||||||
Sbjct 292 GCTGA-CGCGCCAAGCCCGTTCCCTT 316
>seq139
Length=398
Score = 138 bits (152), Expect = 4e-30
Identities = 90/99 (91%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||||||||| | | ||||||||||||| |||||| ||||||| ||||| ||||||||||
Sbjct 223 CTTTTGCTCGGCTGAAGATTTCTGTTCTTCATGAGCCCCCCTTGGGACATCTGCGTTATG 282
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTG 105
|||||||||||||||||||||||||||||||||| ||||
Sbjct 283 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCGCCTG 321
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635190221504
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |