Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016425.1_202016-02-08] 598 sequences; 9,476,861 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq57 443 7e-122 seq171 414 3e-113 seq147 403 6e-110 seq183 291 3e-76 seq192 138 4e-30 seq139 138 4e-30 >seq57 Length=1263 Score = 443 bits (490), Expect = 7e-122 Identities = 297/327 (91%), Gaps = 7/327 (2%) Strand=Plus/Minus Query 198 AACGATAAGGGTAGTGGTATTTCACTTGCGCCG---AAACGGCTCCCACTTATTCTACAC 254 ||| ||| |||| | |||||||||| |||||| ||||||||||| | ||| |||||| Sbjct 538 AACTATAGGGGTGGGGGTATTTCACGGGCGCCGCCGAAACGGCTCCCCCCTATACTACAC 479 Query 255 CTCTCAAGTCATTTCACAAAGTCGGA-CTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCC 313 | | || || | | || | | | ||||||||||||||||||||||||||||||||| Sbjct 478 CCCCCATGT--TCCCCCACGGCCCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCC 421 Query 314 GCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAG 373 ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 420 GCTGACGC-GCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAG 362 Query 374 TGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTAC 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 TGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTAC 302 Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 301 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGATGAATTTCTTCACTTT 242 Query 494 GACATTCAGAGCACTGGGCAGAAATCA 520 ||||||||||||||||||||||||||| Sbjct 241 GACATTCAGAGCACTGGGCAGAAATCA 215 Score = 138 bits (152), Expect = 4e-30 Identities = 90/99 (91%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||| | | ||||||||||||| |||||| ||||||| ||||| |||||||||| Sbjct 662 CTTTTGCTCGGCTGAAGATTTCTGTTCTTCATGAGCCCCCCTTGGGACATCTGCGTTATG 603 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTG 105 |||||||||||||||||||||||||||||||||| |||| Sbjct 602 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCGCCTG 564 >seq171 Length=346 Score = 414 bits (458), Expect = 3e-113 Identities = 237/241 (98%), Gaps = 1/241 (0%) Strand=Plus/Plus Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTT 339 ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct 39 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGACGC-GCCAAGCCCGTTCCCTT 97 Query 340 GGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGC 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 98 GGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGC 157 Query 400 GCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGC 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 158 GCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGC 217 Query 460 CGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATC 519 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 218 CGTTTACCCGCGCTTGGATGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATC 277 Query 520 A 520 | Sbjct 278 A 278 >seq147 Length=382 Score = 403 bits (446), Expect = 6e-110 Identities = 275/305 (90%), Gaps = 7/305 (2%) Strand=Plus/Plus Query 198 AACGATAAGGGTAGTGGTATTTCACTTGCGCCG---AAACGGCTCCCACTTATTCTACAC 254 ||| ||| |||| | |||||||||| |||||| ||||||||||| | ||| |||||| Sbjct 81 AACTATAGGGGTGGGGGTATTTCACGGGCGCCGCCGAAACGGCTCCCCCCTATACTACAC 140 Query 255 CTCTCAAGTCATTTCACAAAGTCGGA-CTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCC 313 | | || || | | || | | | ||||||||||||||||||||||||||||||||| Sbjct 141 CCCCCATGT--TCCCCCACGGCCCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCC 198 Query 314 GCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAG 373 ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 199 GCTGACGC-GCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAG 257 Query 374 TGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTAC 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 258 TGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTAC 317 Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 318 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGATGAATTTCTTCACTTT 377 Query 494 GACAT 498 ||||| Sbjct 378 GACAT 382 Score = 91.5 bits (100), Expect = 5e-16 Identities = 53/55 (96%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 51 GGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTG 105 ||||| |||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1 GGACATCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCGCCTG 55 >seq183 Length=339 Score = 291 bits (322), Expect = 3e-76 Identities = 163/164 (99%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 60 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 120 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 ATGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 164 >seq192 Length=316 Score = 138 bits (152), Expect = 4e-30 Identities = 90/99 (91%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||| | | ||||||||||||| |||||| ||||||| ||||| |||||||||| Sbjct 50 CTTTTGCTCGGCTGAAGATTTCTGTTCTTCATGAGCCCCCCTTGGGACATCTGCGTTATG 109 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTG 105 |||||||||||||||||||||||||||||||||| |||| Sbjct 110 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCGCCTG 148 Score = 122 bits (134), Expect = 3e-25 Identities = 117/146 (80%), Gaps = 7/146 (5%) Strand=Plus/Plus Query 198 AACGATAAGGGTAGTGGTATTTCACTTGCGCCG---AAACGGCTCCCACTTATTCTACAC 254 ||| ||| |||| | |||||||||| |||||| ||||||||||| | ||| |||||| Sbjct 174 AACTATAGGGGTGGGGGTATTTCACGGGCGCCGCCGAAACGGCTCCCCCCTATACTACAC 233 Query 255 CTCTCAAGTCATTTCACAAAGTCGGA-CTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCC 313 | | || || | | || | | | ||||||||||||||||||||||||||||||||| Sbjct 234 CCCCCATGT--TCCCCCACGGCCCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCC 291 Query 314 GCTGATTCCGCCAAGCCCGTTCCCTT 339 ||||| |||||||||||||||||| Sbjct 292 GCTGA-CGCGCCAAGCCCGTTCCCTT 316 >seq139 Length=398 Score = 138 bits (152), Expect = 4e-30 Identities = 90/99 (91%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||| | | ||||||||||||| |||||| ||||||| ||||| |||||||||| Sbjct 223 CTTTTGCTCGGCTGAAGATTTCTGTTCTTCATGAGCCCCCCTTGGGACATCTGCGTTATG 282 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTG 105 |||||||||||||||||||||||||||||||||| |||| Sbjct 283 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCGCCTG 321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635190221504