Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016425.1_202016-02-08] 598 sequences; 9,476,861 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq89 96.9 7e-18 seq595 82.4 2e-13 >seq89 Length=507 Score = 96.9 bits (106), Expect = 7e-18 Identities = 134/189 (71%), Gaps = 18/189 (10%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||||||| ||||||||| |||||||| ||||| ||| Sbjct 171 GGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCGCCGGGTAC---------------CGT 127 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 || | || ||||| | |||||| ||||| | ||| || ||||| || |||||| Sbjct 126 C--AGATCTTCTTCCCCGACAAAAGAGCTTTACGACCCGAAGG-CCTTCTTCGCTCACGC 70 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | |||| |||| || ||| |||||| ||| ||||||| |||||||||||||||| Sbjct 69 GGCGTTGCTGCGTCAGGCTTTCGCCCATTGCGCAAGATTCCTCGCTGCTGCCTCCCGTAG 10 Query 181 GAGTTTGGA 189 |||| |||| Sbjct 9 GAGTCTGGA 1 >seq595 Length=100 Score = 82.4 bits (90), Expect = 2e-13 Identities = 79/100 (79%), Gaps = 1/100 (1%) Strand=Plus/Minus Query 89 TTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCAT 148 ||||||| ||| || ||||| || ||||| | | |||| |||| || ||| |||| Sbjct 100 TTTACAACCCGAAGG-CCTTCTTCACACACGCGGCATTGCTGCGTCAGGCTTTCGCCCAT 42 Query 149 TGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGG 188 || ||||||||| |||||||||||||||||||||| ||| Sbjct 41 TGCGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGG 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068793608576