Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016455.1_202016-02-08]
151 sequences; 9,358,738 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq88 215 8e-54
seq42 215 8e-54
>seq88
Length=372
Score = 215 bits (238), Expect = 8e-54
Identities = 192/234 (82%), Gaps = 15/234 (6%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||| |
Sbjct 1 GTACAAAGGGCAGGGACGTAATCAGCGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 58
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
|||||||||| | | |||||| | ||||||||| ||||| | | | | ||||||
Sbjct 59 CTCGTTGAAGCGCCTC--TTGCAAAGCGCTATCCCCAGCACGACGGAGTCT--AAGATTC 114
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||||| | | || | ||||| ||||| || | | ||||||||||||||||||||
Sbjct 115 CCCGGCCATCTCTGGCAAGG------ACTCGCTGCCTCCGTCAGTGTAGCGCGCGTGCGG 168
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCG-TGGC 233
|||||||| ||||||||||||||||||||||||||||||| |||||| ||||
Sbjct 169 CCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTC--GCTTCCGCTGGC 220
>seq42
Length=3691
Score = 215 bits (238), Expect = 8e-54
Identities = 192/234 (82%), Gaps = 15/234 (6%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||| |
Sbjct 1909 GTACAAAGGGCAGGGACGTAATCAGCGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 1966
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
|||||||||| | | |||||| | ||||||||| ||||| | | | | ||||||
Sbjct 1967 CTCGTTGAAGCGCCTC--TTGCAAAGCGCTATCCCCAGCACGACGGAGTCT--AAGATTC 2022
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||||| | | || | ||||| ||||| || | | ||||||||||||||||||||
Sbjct 2023 CCCGGCCATCTCTGGCAAGG------ACTCGCTGCCTCCGTCAGTGTAGCGCGCGTGCGG 2076
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCG-TGGC 233
|||||||| ||||||||||||||||||||||||||||||| |||||| ||||
Sbjct 2077 CCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTC--GCTTCCGCTGGC 2128
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751998899965
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |