Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016455.1_202016-02-08]
151 sequences; 9,358,738 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq42 197 6e-48
>seq42
Length=3691
Score = 197 bits (218), Expect = 6e-48
Identities = 127/138 (92%), Gaps = 2/138 (1%)
Strand=Plus/Minus
Query 548 TGAGTAAG--AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTG 605
||||| || |||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 998 TGAGTGAGCCAGCACCCCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCG 939
Query 606 AAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAA 665
||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||| |
Sbjct 938 AAGCCTGAGGAAACTCTGGTGGAGGCCCGCAGCGGTTCTGACGTGCAAATCGATCGTCGA 879
Query 666 ATTTGGGTATAGGGGCGA 683
||||||||||||||||||
Sbjct 878 ATTTGGGTATAGGGGCGA 861
Score = 158 bits (174), Expect = 5e-36
Identities = 134/163 (82%), Gaps = 3/163 (2%)
Strand=Plus/Minus
Query 36 CGAC-GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
|||| ||||||||||||||||||||||||||||||| || |||| | | || || |
Sbjct 1280 CGACAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAA--GGTGGTAGGGTCCATCAAAGAC 1223
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
||||||| || ||||||||||||| ||||||| |||||| ||||||||||||| ||||
Sbjct 1222 TAAATATCAGCGAGAGACCGATAGCAAACAAGTACAGTGATGGAAAGATGAAAAGAACTT 1163
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197
|| ||||||||| ||| || |||||||||| | |||||||
Sbjct 1162 TGAAAAGAGAGTGAAACAGTGCGTGAAATTGGGGGGAGGGAAG 1120
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079996761050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |