Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016455.1_202016-02-08] 151 sequences; 9,358,738 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq42 253 3e-65 seq88 250 4e-64 >seq42 Length=3691 Score = 253 bits (280), Expect = 3e-65 Identities = 214/257 (83%), Gaps = 7/257 (3%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 2043 ACTCGCTGCCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 2102 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||| ||||| ||||| | |||| | |||| ||||||||| | || Sbjct 2103 CCTGTTATTGCCTCG--CTTCCGCTGGCTTGC-GCCAGTTGTCCTTCTAAGAAG--ATCC 2157 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 ||| | || | | ||| ||| || ||||||||||||||||||| |||||| Sbjct 2158 CCCAGCAATGCCAGGTAAC-CTAGTTAAAAGCC-AAGGTCTCGTTCGTTATCGCAATTAA 2215 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 2216 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAA 2275 Query 242 AGAGCTATCAATCTGTC 258 || ||| ||| ||||| Sbjct 2276 AGTGCTCTCATCCTGTC 2292 >seq88 Length=372 Score = 250 bits (276), Expect = 4e-64 Identities = 206/245 (84%), Gaps = 7/245 (3%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 135 ACTCGCTGCCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 194 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||| ||||| ||||| | |||| | |||| ||||||||| | || Sbjct 195 CCTGTTATTGCCTCG--CTTCCGCTGGCTTGC-GCCAGTTGTCCTTCTAAGAAG--ATCC 249 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 ||| | || | | ||| ||| || ||||||||||||||||||| |||||| Sbjct 250 CCCAGCAATGCCAGGTAAC-CTAGTTAAAAGCC-AAGGTCTCGTTCGTTATCGCAATTAA 307 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 308 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCAAGAA 367 Query 242 AGAGC 246 || || Sbjct 368 AGTGC 372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796798834431