Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016475.1_202016-02-08] 166 sequences; 9,367,240 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq65 250 5e-64 seq103 206 5e-51 >seq65 Length=393 Score = 250 bits (276), Expect = 5e-64 Identities = 211/257 (82%), Gaps = 13/257 (5%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 ||||||||| |||| | ||| |||||| ||||| ||||||||||||||||||||| Sbjct 386 CTTCTTAGAAGGACAACTGGCGCAAGCCAGCGGAAGC--GAGGCAATAACAGGTCTGTGA 329 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 |||||||||| ||||||||||||||||||||||||||||| ||| || ||||| | Sbjct 328 TGCCCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGGCAGCGAGT------C 275 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 |||| | | | | | ||| |||| ||| |||| |||||||||||||||| || |||| Sbjct 274 CTTGCCAGAGATGGCCGGGGAATC---TTAGACTCCGTCGTGCTGGGGATAGCGCTTTGC 218 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 || || |||||||||||||| ||||||||||||| ||||||||| |||| |||||| Sbjct 217 AA--GAGGCGCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGCTGATTA 160 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||||||||||| Sbjct 159 CGTCCCTGCCCTTTGTA 143 >seq103 Length=225 Score = 206 bits (228), Expect = 5e-51 Identities = 190/238 (80%), Gaps = 13/238 (5%) Strand=Plus/Minus Query 78 AGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137 ||| |||| | ||| |||||| ||||| ||||||||||||||||||||||||| | Sbjct 225 AGAAGGACAACTGGCGCAAGCCAGCGGAAGC--GAGGCAATAACAGGTCTGTGATGCCGT 168 Query 138 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGC 197 |||| ||||||||||| ||||||||||||||||| ||| || ||||| ||||| | Sbjct 167 TAGACGTTCTGGGCCGAACGCGCGCTACACTGACGGAGGCAGCGAGT------CCTTGCC 114 Query 198 CGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTAT 257 | | | | ||| |||| ||| |||| |||||||||||||||| || |||||| Sbjct 113 AGAGATGGCCGGGGAATC---TTAGACTCCGTCGTGCTGGGGATAGCGCTTTGCAA--GA 59 Query 258 TGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTC 315 || |||||||||||||| ||||||||||||| ||||||||| |||| |||||||||| Sbjct 58 GGCGCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGCTGATTACGTC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947198427648