Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016475.1_202016-02-08] 166 sequences; 9,367,240 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq100 298 2e-78 seq58 138 4e-30 seq59 132 2e-28 >seq100 Length=231 Score = 298 bits (330), Expect = 2e-78 Identities = 209/234 (89%), Gaps = 7/234 (3%) Strand=Plus/Minus Query 215 TATTTCACTTGCGCCG---AAACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCAC 271 |||||||| |||||| ||||||||||| | ||| ||||||| | || || | | | Sbjct 231 TATTTCACGGGCGCCGCCGAAACGGCTCCCCCCTATACTACACCCCCCATGT--TCCCCC 174 Query 272 AAAGTCGGA-CTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCC 330 | | | | |||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 173 ACGGCCCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGACGC-GCCAAGCC 115 Query 331 CGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATC 390 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 114 CGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATC 55 Query 391 CATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGT 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 54 CATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGT 1 >seq58 Length=729 Score = 138 bits (152), Expect = 4e-30 Identities = 90/99 (91%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||| | | ||||||||||||| |||||| ||||||| ||||| |||||||||| Sbjct 599 CTTTTGCTCGGCTGAAGATTTCTGTTCTTCATGAGCCCCCCTTGGGACATCTGCGTTATG 658 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTG 105 |||||||||||||||||||||||||||||||||| |||| Sbjct 659 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCGCCTG 697 >seq59 Length=539 Score = 132 bits (146), Expect = 2e-28 Identities = 75/76 (99%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 445 CATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAG 504 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1 CATAGTTACTCCCGCCGTTTACCCGCGCTTGGATGAATTTCTTCACTTTGACATTCAGAG 60 Query 505 CACTGGGCAGAAATCA 520 |||||||||||||||| Sbjct 61 CACTGGGCAGAAATCA 76 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635197285568