Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016485.1_202016-02-08] 131 sequences; 9,353,010 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq50 197 6e-48 >seq50 Length=3710 Score = 197 bits (218), Expect = 6e-48 Identities = 127/138 (92%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 548 TGAGTAAG--AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTG 605 ||||| || |||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct 3010 TGAGTGAGCCAGCACCCCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCG 3069 Query 606 AAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAA 665 ||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||| | Sbjct 3070 AAGCCTGAGGAAACTCTGGTGGAGGCCCGCAGCGGTTCTGACGTGCAAATCGATCGTCGA 3129 Query 666 ATTTGGGTATAGGGGCGA 683 |||||||||||||||||| Sbjct 3130 ATTTGGGTATAGGGGCGA 3147 Score = 158 bits (174), Expect = 5e-36 Identities = 134/163 (82%), Gaps = 3/163 (2%) Strand=Plus/Plus Query 36 CGAC-GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 |||| ||||||||||||||||||||||||||||||| || |||| | | || || | Sbjct 2728 CGACAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAA--GGTGGTAGGGTCCATCAAAGAC 2785 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||| || ||||||||||||| ||||||| |||||| ||||||||||||| |||| Sbjct 2786 TAAATATCAGCGAGAGACCGATAGCAAACAAGTACAGTGATGGAAAGATGAAAAGAACTT 2845 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197 || ||||||||| ||| || |||||||||| | ||||||| Sbjct 2846 TGAAAAGAGAGTGAAACAGTGCGTGAAATTGGGGGGAGGGAAG 2888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079997190050