Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016495.1_202016-02-08]
134 sequences; 9,351,186 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq28 210 2e-49
seq25 187 2e-42
>seq28
Length=271146
Score = 210 bits (232), Expect = 2e-49
Identities = 728/1130 (64%), Gaps = 28/1130 (2%)
Strand=Plus/Plus
Query 65806 AAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACG 65865
||||| || || | ||||||||| || | | | || || | || ||||| ||| || |
Sbjct 88552 AAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCATATTCGATCT 88611
Query 65866 TCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCAC 65925
|| || || || || ||||| |||| | |||||||| | ||||| || || || ||
Sbjct 88612 CCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGTTACGAGTAAC 88671
Query 65926 CACATGCACGATACGTCGCAATTGTTCGAAATCAAAATGTTTAGGACGATCGG-GAGTGC 65984
||| | ||| ||| | ||| || | ||| || | | | ||||
Sbjct 88672 CACTTTGGTGATTTCATGCAGCTTTTCAAAGT-----TGT-----ACCAGCAGTGAGTAT 88721
Query 65985 C---GGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGT 66041
| || | ||||| ||||| |||| ||| || | ||| |||||||| |||| |
Sbjct 88722 CATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCTT 88781
Query 66042 CAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAAT 66101
| || | | || || |||||||| ||| || ||| | | ||| ||||| |
Sbjct 88782 CCGGGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAGT 88841
Query 66102 TCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCT 66161
||| || ||| | || || || |||||||| |||| |||| | ||||| || || |
Sbjct 88842 TCTTCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGTTT 88901
Query 66162 CAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCC 66221
| ||| | ||||| |||||||| |||||| | || || | || || | |
Sbjct 88902 CTGTTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGATGGTTTGTCTTCCAC 88961
Query 66222 TACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACC-CCATA--CTTCGG 66278
||||| |||||| |||||| | | || || |||| | ||||| | ||||
Sbjct 88962 GACCTTCCTTTTCGTATCTTTCGTACAATTCCTCAAA---TTCATCTCCATAGACGTCGG 89018
Query 66279 ACAGACATGGA----CACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACA 66334
|| | ||| |||||| || | | ||| | |||||| |||| |||||||||
Sbjct 89019 CAAGGCCAGGAGCTTCACTTG----GAGAGAACAGGGTCCAATCGCCATTCTGTTCTACT 89074
Query 66335 CGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCC 66394
| ||| || |||||||| ||||| | ||| ||| | || | |||| ||||
Sbjct 89075 CTTTTCATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTCC 89134
Query 66395 TCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCC 66454
|| | || || || || || | || | ||| |||||||||||||||||||||| |||
Sbjct 89135 TCTTTACCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCC 89194
Query 66455 AGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACA 66514
| ||| | || || | || ||||||| ||||||||||| || || |||||
Sbjct 89195 AAGTACAAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTG 89254
Query 66515 TTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATG 66574
||||||||||| | || ||| || | | || || || | || || || || | |||
Sbjct 89255 TTGTTGAAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATG 89314
Query 66575 GGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAG 66634
||||||| || || |||| |||| | || |||||| ||||| || || || |||
Sbjct 89315 TAGGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAG 89374
Query 66635 ATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTC 66694
|| |||||| || || || | | ||||| ||||| |||||| || ||||
Sbjct 89375 ATTAAAGCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCA 89434
Query 66695 AGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTA 66754
| | | | ||||| | ||| || | || || | || || || || || |
Sbjct 89435 ACTAAGAAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAG 89494
Query 66755 GCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTT 66814
|| || || || || | || ||| | || || || || || || ||||||
Sbjct 89495 GCATGAGTGAAATACTTCTGACTCATAAAGTTATAAGTTTCAATAACTCTTGCAATGTCA 89554
Query 66815 TCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGA 66874
|| |||||||| |||| ||| ||||| | | || |||||| ||||| | | |
Sbjct 89555 TCACCATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAACATTA 89614
Query 66875 TCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924
| || || || | ||| || | ||||| |||||||| ||||||||
Sbjct 89615 CCATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTA 89664
>seq25
Length=536034
Score = 187 bits (206), Expect = 2e-42
Identities = 591/900 (66%), Gaps = 22/900 (2%)
Strand=Plus/Minus
Query 61025 ATGAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGG 61084
||||||| || || |||||| |||||||| || | ||||| | |||| | |
Sbjct 216787 ATGAACCACTCTTAGTTGAGAATAAACGTCGTTTTGTGCTCTTCCCTTTGAAGTACCACG 216728
Query 61085 ATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATT 61144
|||| |||| |||||||| |||| ||||||||||| ||||| | ||||| | ||
Sbjct 216727 ATATCTGGCAAATGTACAAGCAGGCCGAAGCTTCCTTTTGGACTGCTGAGGAAATAGACC 216668
Query 61145 TGTCCAAAGACATGAATGACTGGGAGCGTT-TATCGAGCGGT---GAACAACATTTCAT- 61199
|| || || || |||||||| | | ||| || || | ||| || |||||
Sbjct 216667 TGGGTAAGGATTTGCATGACTGGAATAATCGTAT-GAACGATAATGAAAAATTCTTCATC 216609
Query 61200 TAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGA 61259
| | | || | || |||||||| || || |||||||| |||||||| || || ||||
Sbjct 216608 TCGAGA-GTCCTTGCCTTCTTTGCTGCCTCTGACGGTATTGTCAATGAAAACTTGGTGGA 216550
Query 61260 ACGTTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTG 61318
| |||| | || | |||| ||| | | || || || || ||||| ||||||||
Sbjct 216549 AAATTTCAGTGCTG-AGGTTCAACTTCCCGAAGCAAAATGCTTTTACGGTTTCCAGATCA 216491
Query 61319 CCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378
|||||||| | ||||| |||| ||| | || || ||||| ||||||| || |
Sbjct 216490 TGATGGAGAACATTCACTCCGAGACTTACTCCTTGCTGATTGATACTTACATCAAAGATC 216431
Query 61379 GGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAG 61438
|| |||| ||||||||||||||||||| || || | || || |
Sbjct 216430 CAAAAGAGTCTGAATTCCTGTTCAATGCCATCGAGACCATTCCATGTATCAAAGAAAAGG 216371
Query 61439 CGGATTGGGCCTTCAATTGGATCACCAGT-ACAACGGCTACATTTGGTGAACGATTGCTG 61497
| || |||||| | | ||||| | | || | | | || | |||||| ||| |
Sbjct 216370 CTGACTGGGCCATGAGATGGATTTCTGATGACGATGCATTG-TTCGCTGAACGTTTGGTT 216312
Query 61498 GCATTTGCGGTGGTCGAGGGTGTATT--TTTCAGTGGATCGTTTGCCGCAATCTTTTGGT 61555
|| || || | || |||||| | || |||||| |||| ||||| | ||||| ||||
Sbjct 216311 GCCTTCGCTGCTGTTGAGGGTATCTTCTTTTCAG--GATCTTTTGCTTCTATCTTCTGGT 216254
Query 61556 TGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACG 61615
||||||| | || || ||||| ||| |||||||| ||||||| | || | | ||||
Sbjct 216253 TGAAGAAGAGAGGTCTCATGCCAGGTTTGACCTTCTCCAATGAGCTTATTTGCAGAGACG 216194
Query 61616 AGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGT 61675
|||| | || ||| |||||| |||||||| | || | ||| | |
Sbjct 216193 AGGGATTACACACTGACTTTGCTTGCTTGCTATTTTCTC---ATTTAAACAATAGAGCCA 216137
Query 61676 CGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCG--AACAGGAATTTCT 61733
||||| || | ||||| | ||||| || |||| || ||| | |||
Sbjct 216136 GTGAGGAAATCGTTGAAAAGATTATCACAGAGGCTGTCGAGATCGAAAAAAGGTACTTC- 216078
Query 61734 GACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATAT 61793
|| |||||| | || ||||| | | || ||||| || | | |||| |||||| |
Sbjct 216077 -ACAGACGCTCTTCCTGTCTCCTTACTGGGGATGAACTGCAGCTTGATGTGCCAGTATGT 216019
Query 61794 TGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAA 61853
||| || ||||| ||| | || |||| | | |||| | || | | || || ||
Sbjct 216018 TGAGTTCGTTGCTGACAGACTACTGGTAGCTCTGGGCAACAAAAAGGTGTACAACGTCAA 215959
Query 61854 AAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913
|| |||||||| |||||||| | ||||| ||| || || || || || ||||| ||
Sbjct 215958 CAATCCATTTGACTTCATGGAGAACATTTCTTTGGCCGGTAAAACCAACTTCTTCGAAAA 215899
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567350721760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |