Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016525.1_202016-02-08] 195 sequences; 9,366,705 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq114 197 6e-48 seq103 197 6e-48 seq99 197 6e-48 seq110 158 5e-36 >seq114 Length=367 Score = 197 bits (218), Expect = 6e-48 Identities = 127/138 (92%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 548 TGAGTAAG--AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTG 605 ||||| || |||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct 199 TGAGTGAGCCAGCACCCCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCG 258 Query 606 AAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAA 665 ||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||| | Sbjct 259 AAGCCTGAGGAAACTCTGGTGGAGGCCCGCAGCGGTTCTGACGTGCAAATCGATCGTCGA 318 Query 666 ATTTGGGTATAGGGGCGA 683 |||||||||||||||||| Sbjct 319 ATTTGGGTATAGGGGCGA 336 Score = 84.2 bits (92), Expect = 9e-14 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 122 ACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAA 181 ||||||| |||||| ||||||||||||| |||||| ||||||||| ||| || |||||| Sbjct 2 ACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAACAGTGCGTGAA 61 Query 182 ATTGTTGAAAGGGAAG 197 |||| | ||||||| Sbjct 62 ATTGGGGGGAGGGAAG 77 >seq103 Length=978 Score = 197 bits (218), Expect = 6e-48 Identities = 127/138 (92%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 548 TGAGTAAG--AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTG 605 ||||| || |||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct 655 TGAGTGAGCCAGCACCCCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCG 714 Query 606 AAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAA 665 ||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||| | Sbjct 715 AAGCCTGAGGAAACTCTGGTGGAGGCCCGCAGCGGTTCTGACGTGCAAATCGATCGTCGA 774 Query 666 ATTTGGGTATAGGGGCGA 683 |||||||||||||||||| Sbjct 775 ATTTGGGTATAGGGGCGA 792 Score = 158 bits (174), Expect = 5e-36 Identities = 134/163 (82%), Gaps = 3/163 (2%) Strand=Plus/Plus Query 36 CGAC-GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 |||| ||||||||||||||||||||||||||||||| || |||| | | || || | Sbjct 373 CGACAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAA--GGTGGTAGGGTCCATCAAAGAC 430 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||| || ||||||||||||| ||||||| |||||| ||||||||||||| |||| Sbjct 431 TAAATATCAGCGAGAGACCGATAGCAAACAAGTACAGTGATGGAAAGATGAAAAGAACTT 490 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197 || ||||||||| ||| || |||||||||| | ||||||| Sbjct 491 TGAAAAGAGAGTGAAACAGTGCGTGAAATTGGGGGGAGGGAAG 533 >seq99 Length=1135 Score = 197 bits (218), Expect = 6e-48 Identities = 127/138 (92%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 548 TGAGTAAG--AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTG 605 ||||| || |||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct 1043 TGAGTGAGCCAGCACCCCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCG 984 Query 606 AAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAA 665 ||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||| | Sbjct 983 AAGCCTGAGGAAACTCTGGTGGAGGCCCGCAGCGGTTCTGACGTGCAAATCGATCGTCGA 924 Query 666 ATTTGGGTATAGGGGCGA 683 |||||||||||||||||| Sbjct 923 ATTTGGGTATAGGGGCGA 906 >seq110 Length=407 Score = 158 bits (174), Expect = 5e-36 Identities = 134/163 (82%), Gaps = 3/163 (2%) Strand=Plus/Plus Query 36 CGAC-GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 |||| ||||||||||||||||||||||||||||||| || |||| | | || || | Sbjct 95 CGACAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAA--GGTGGTAGGGTCCATCAAAGAC 152 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||| || ||||||||||||| ||||||| |||||| ||||||||||||| |||| Sbjct 153 TAAATATCAGCGAGAGACCGATAGCAAACAAGTACAGTGATGGAAAGATGAAAAGAACTT 212 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197 || ||||||||| ||| || |||||||||| | ||||||| Sbjct 213 TGAAAAGAGAGTGAAACAGTGCGTGAAATTGGGGGGAGGGAAG 255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079995817250