Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016525.1_202016-02-08]
195 sequences; 9,366,705 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq114 197 6e-48
seq103 197 6e-48
seq99 197 6e-48
seq110 158 5e-36
>seq114
Length=367
Score = 197 bits (218), Expect = 6e-48
Identities = 127/138 (92%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 548 TGAGTAAG--AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTG 605
||||| || |||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 199 TGAGTGAGCCAGCACCCCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCG 258
Query 606 AAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAA 665
||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||| |
Sbjct 259 AAGCCTGAGGAAACTCTGGTGGAGGCCCGCAGCGGTTCTGACGTGCAAATCGATCGTCGA 318
Query 666 ATTTGGGTATAGGGGCGA 683
||||||||||||||||||
Sbjct 319 ATTTGGGTATAGGGGCGA 336
Score = 84.2 bits (92), Expect = 9e-14
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 122 ACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAA 181
||||||| |||||| ||||||||||||| |||||| ||||||||| ||| || ||||||
Sbjct 2 ACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAACAGTGCGTGAA 61
Query 182 ATTGTTGAAAGGGAAG 197
|||| | |||||||
Sbjct 62 ATTGGGGGGAGGGAAG 77
>seq103
Length=978
Score = 197 bits (218), Expect = 6e-48
Identities = 127/138 (92%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 548 TGAGTAAG--AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTG 605
||||| || |||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 655 TGAGTGAGCCAGCACCCCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCG 714
Query 606 AAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAA 665
||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||| |
Sbjct 715 AAGCCTGAGGAAACTCTGGTGGAGGCCCGCAGCGGTTCTGACGTGCAAATCGATCGTCGA 774
Query 666 ATTTGGGTATAGGGGCGA 683
||||||||||||||||||
Sbjct 775 ATTTGGGTATAGGGGCGA 792
Score = 158 bits (174), Expect = 5e-36
Identities = 134/163 (82%), Gaps = 3/163 (2%)
Strand=Plus/Plus
Query 36 CGAC-GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
|||| ||||||||||||||||||||||||||||||| || |||| | | || || |
Sbjct 373 CGACAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAA--GGTGGTAGGGTCCATCAAAGAC 430
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
||||||| || ||||||||||||| ||||||| |||||| ||||||||||||| ||||
Sbjct 431 TAAATATCAGCGAGAGACCGATAGCAAACAAGTACAGTGATGGAAAGATGAAAAGAACTT 490
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197
|| ||||||||| ||| || |||||||||| | |||||||
Sbjct 491 TGAAAAGAGAGTGAAACAGTGCGTGAAATTGGGGGGAGGGAAG 533
>seq99
Length=1135
Score = 197 bits (218), Expect = 6e-48
Identities = 127/138 (92%), Gaps = 2/138 (1%)
Strand=Plus/Minus
Query 548 TGAGTAAG--AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTG 605
||||| || |||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1043 TGAGTGAGCCAGCACCCCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCG 984
Query 606 AAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAA 665
||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||| |
Sbjct 983 AAGCCTGAGGAAACTCTGGTGGAGGCCCGCAGCGGTTCTGACGTGCAAATCGATCGTCGA 924
Query 666 ATTTGGGTATAGGGGCGA 683
||||||||||||||||||
Sbjct 923 ATTTGGGTATAGGGGCGA 906
>seq110
Length=407
Score = 158 bits (174), Expect = 5e-36
Identities = 134/163 (82%), Gaps = 3/163 (2%)
Strand=Plus/Plus
Query 36 CGAC-GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
|||| ||||||||||||||||||||||||||||||| || |||| | | || || |
Sbjct 95 CGACAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAA--GGTGGTAGGGTCCATCAAAGAC 152
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
||||||| || ||||||||||||| ||||||| |||||| ||||||||||||| ||||
Sbjct 153 TAAATATCAGCGAGAGACCGATAGCAAACAAGTACAGTGATGGAAAGATGAAAAGAACTT 212
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197
|| ||||||||| ||| || |||||||||| | |||||||
Sbjct 213 TGAAAAGAGAGTGAAACAGTGCGTGAAATTGGGGGGAGGGAAG 255
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079995817250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |