Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016525.1_202016-02-08] 195 sequences; 9,366,705 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq102 250 5e-64 seq84 250 5e-64 >seq102 Length=1060 Score = 250 bits (276), Expect = 5e-64 Identities = 211/257 (82%), Gaps = 13/257 (5%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 ||||||||| |||| | ||| |||||| ||||| ||||||||||||||||||||| Sbjct 648 CTTCTTAGAAGGACAACTGGCGCAAGCCAGCGGAAGC--GAGGCAATAACAGGTCTGTGA 591 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 |||||||||| ||||||||||||||||||||||||||||| ||| || ||||| | Sbjct 590 TGCCCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGGCAGCGAGT------C 537 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 |||| | | | | | ||| |||| ||| |||| |||||||||||||||| || |||| Sbjct 536 CTTGCCAGAGATGGCCGGGGAATC---TTAGACTCCGTCGTGCTGGGGATAGCGCTTTGC 480 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 || || |||||||||||||| ||||||||||||| ||||||||| |||| |||||| Sbjct 479 AA--GAGGCGCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGCTGATTA 422 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||||||||||| Sbjct 421 CGTCCCTGCCCTTTGTA 405 >seq84 Length=2538 Score = 250 bits (276), Expect = 5e-64 Identities = 211/257 (82%), Gaps = 13/257 (5%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 ||||||||| |||| | ||| |||||| ||||| ||||||||||||||||||||| Sbjct 648 CTTCTTAGAAGGACAACTGGCGCAAGCCAGCGGAAGC--GAGGCAATAACAGGTCTGTGA 591 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 |||||||||| ||||||||||||||||||||||||||||| ||| || ||||| | Sbjct 590 TGCCCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGGCAGCGAGT------C 537 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 |||| | | | | | ||| |||| ||| |||| |||||||||||||||| || |||| Sbjct 536 CTTGCCAGAGATGGCCGGGGAATC---TTAGACTCCGTCGTGCTGGGGATAGCGCTTTGC 480 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 || || |||||||||||||| ||||||||||||| ||||||||| |||| |||||| Sbjct 479 AA--GAGGCGCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGCTGATTA 422 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||||||||||| Sbjct 421 CGTCCCTGCCCTTTGTA 405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947198152960