Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016535.1_202016-02-08]
162 sequences; 9,346,869 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq56 574 1e-161
>seq56
Length=2475
Score = 574 bits (636), Expect = 1e-161
Identities = 432/504 (86%), Gaps = 48/504 (10%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||
Sbjct 1138 GTACTCATTCCAATTACAAGACC--AAAG-GCCCTGTATCGTTATTTATTGTCACTACCT 1082
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1081 CCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTC 1022
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
|||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||
Sbjct 1021 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTAGAAACCATGGTA 962
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 961 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATC-----CT 907
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
| |||||| |||||||||||||||||||| ||||||
Sbjct 906 AA---------GATTCGAAAAGTTATTATGAATCACCAA-----AACGAAGG-------- 869
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
||||||||||||||||| | |||| ||| | | || |||||||||||||
Sbjct 868 -TTTTATCTAATAAATACGC-----CCGA----GGG---CTGATCAAGTATTAGCTCTAG 822
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||
Sbjct 821 AATTACCACGGTTATCCTTGTAGCAA--CACTATCAAATAAACGATAACTGATTTAATGA 764
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480
||||||||||||||||| |||| | ||| ||||||||||||||||||||||||||||||
Sbjct 763 GCCATTCGCAGTTTCACCGTAT--AATGC-TATACTTAGACATGCATGGCTTAATCTTTG 707
Query 481 AGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||
Sbjct 706 AGACAAGCATATGACTACTGGCAG 683
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510397553152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |