Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016535.1_202016-02-08] 162 sequences; 9,346,869 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq56 574 1e-161 >seq56 Length=2475 Score = 574 bits (636), Expect = 1e-161 Identities = 432/504 (86%), Gaps = 48/504 (10%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||| Sbjct 1138 GTACTCATTCCAATTACAAGACC--AAAG-GCCCTGTATCGTTATTTATTGTCACTACCT 1082 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1081 CCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTC 1022 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||| Sbjct 1021 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTAGAAACCATGGTA 962 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| |||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 961 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATC-----CT 907 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 | |||||| |||||||||||||||||||| |||||| Sbjct 906 AA---------GATTCGAAAAGTTATTATGAATCACCAA-----AACGAAGG-------- 869 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 ||||||||||||||||| | |||| ||| | | || ||||||||||||| Sbjct 868 -TTTTATCTAATAAATACGC-----CCGA----GGG---CTGATCAAGTATTAGCTCTAG 822 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 ||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||| Sbjct 821 AATTACCACGGTTATCCTTGTAGCAA--CACTATCAAATAAACGATAACTGATTTAATGA 764 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||||| |||| | ||| |||||||||||||||||||||||||||||| Sbjct 763 GCCATTCGCAGTTTCACCGTAT--AATGC-TATACTTAGACATGCATGGCTTAATCTTTG 707 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 706 AGACAAGCATATGACTACTGGCAG 683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510397553152