Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016545.1_202016-02-08]
170 sequences; 9,365,723 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq132 190 9e-46
seq110 161 4e-37
seq60 158 5e-36
>seq132
Length=172
Score = 190 bits (210), Expect = 9e-46
Identities = 113/118 (96%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625
|||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct 1 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCGAAGCCTGAGGAAACTCTGGT 60
Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 61 GGAGGCCCGCAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGA 118
>seq110
Length=270
Score = 161 bits (178), Expect = 4e-37
Identities = 97/102 (95%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 582 GGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGT 641
|||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||
Sbjct 270 GGTGAACTATGCCTGAATAGGGCGAAGCCTGAGGAAACTCTGGTGGAGGCCCGCAGCGGT 211
Query 642 TCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||| ||||||||||||||||| |||||||||||||||||||
Sbjct 210 TCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGA 169
>seq60
Length=373
Score = 158 bits (174), Expect = 5e-36
Identities = 134/163 (82%), Gaps = 3/163 (2%)
Strand=Plus/Minus
Query 36 CGAC-GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
|||| ||||||||||||||||||||||||||||||| || |||| | | || || |
Sbjct 296 CGACAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAA--GGTGGTAGGGTCCATCAAAGAC 239
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
||||||| || ||||||||||||| ||||||| |||||| ||||||||||||| ||||
Sbjct 238 TAAATATCAGCGAGAGACCGATAGCAAACAAGTACAGTGATGGAAAGATGAAAAGAACTT 179
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197
|| ||||||||| ||| || |||||||||| | |||||||
Sbjct 178 TGAAAAGAGAGTGAAACAGTGCGTGAAATTGGGGGGAGGGAAG 136
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079996353500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |