Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016545.1_202016-02-08] 170 sequences; 9,365,723 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq132 190 9e-46 seq110 161 4e-37 seq60 158 5e-36 >seq132 Length=172 Score = 190 bits (210), Expect = 9e-46 Identities = 113/118 (96%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| Sbjct 1 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCGAAGCCTGAGGAAACTCTGGT 60 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct 61 GGAGGCCCGCAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGA 118 >seq110 Length=270 Score = 161 bits (178), Expect = 4e-37 Identities = 97/102 (95%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 582 GGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGT 641 |||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||| Sbjct 270 GGTGAACTATGCCTGAATAGGGCGAAGCCTGAGGAAACTCTGGTGGAGGCCCGCAGCGGT 211 Query 642 TCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||| ||||||||||||||||| ||||||||||||||||||| Sbjct 210 TCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGA 169 >seq60 Length=373 Score = 158 bits (174), Expect = 5e-36 Identities = 134/163 (82%), Gaps = 3/163 (2%) Strand=Plus/Minus Query 36 CGAC-GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 |||| ||||||||||||||||||||||||||||||| || |||| | | || || | Sbjct 296 CGACAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAA--GGTGGTAGGGTCCATCAAAGAC 239 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||| || ||||||||||||| ||||||| |||||| ||||||||||||| |||| Sbjct 238 TAAATATCAGCGAGAGACCGATAGCAAACAAGTACAGTGATGGAAAGATGAAAAGAACTT 179 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197 || ||||||||| ||| || |||||||||| | ||||||| Sbjct 178 TGAAAAGAGAGTGAAACAGTGCGTGAAATTGGGGGGAGGGAAG 136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079996353500