Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016545.1_202016-02-08] 170 sequences; 9,365,723 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq125 224 3e-56 seq100 210 7e-52 seq166 116 1e-23 >seq125 Length=190 Score = 224 bits (248), Expect = 3e-56 Identities = 168/193 (87%), Gaps = 7/193 (4%) Strand=Plus/Plus Query 213 GGTATTTCACTTGCGCCG---AAACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTC 269 |||||||||| |||||| ||||||||||| | ||| ||||||| | || || | | Sbjct 1 GGTATTTCACGGGCGCCGCCGAAACGGCTCCCCCCTATACTACACCCCCCATGT--TCCC 58 Query 270 ACAAAGTCGGA-CTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAG 328 || | | | |||||||||||||||||||||||||||||||||||||| | |||||| Sbjct 59 CCACGGCCCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGACGC-GCCAAG 117 Query 329 CCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAA 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 118 CCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAA 177 Query 389 TCCATTCATGCGC 401 ||||||||||||| Sbjct 178 TCCATTCATGCGC 190 >seq100 Length=333 Score = 210 bits (232), Expect = 7e-52 Identities = 118/119 (99%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 402 GTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCG 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 333 GTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCG 274 Query 462 TTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 273 TTTACCCGCGCTTGGATGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 215 >seq166 Length=109 Score = 116 bits (128), Expect = 1e-23 Identities = 72/77 (94%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 29 TGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCA 88 |||||| |||||| ||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 109 TGTTCTTCATGAGCCCCCCTTGGGACATCTGCGTTATGGTTTAACAGATGTGCCGCCCCA 50 Query 89 GCCAAACTCCCCACCTG 105 |||||||||||| |||| Sbjct 49 GCCAAACTCCCCGCCTG 33 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635197220160