Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016565.1_202016-02-08] 142 sequences; 9,352,642 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq34 210 2e-49 seq30 187 2e-42 >seq34 Length=271129 Score = 210 bits (232), Expect = 2e-49 Identities = 728/1130 (64%), Gaps = 28/1130 (2%) Strand=Plus/Minus Query 65806 AAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACG 65865 ||||| || || | ||||||||| || | | | || || | || ||||| ||| || | Sbjct 182595 AAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCATATTCGATCT 182536 Query 65866 TCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCAC 65925 || || || || || ||||| |||| | |||||||| | ||||| || || || || Sbjct 182535 CCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGTTACGAGTAAC 182476 Query 65926 CACATGCACGATACGTCGCAATTGTTCGAAATCAAAATGTTTAGGACGATCGG-GAGTGC 65984 ||| | ||| ||| | ||| || | ||| || | | | |||| Sbjct 182475 CACTTTGGTGATTTCATGCAGCTTTTCAAAGT-----TGT-----ACCAGCAGTGAGTAT 182426 Query 65985 C---GGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGT 66041 | || | ||||| ||||| |||| ||| || | ||| |||||||| |||| | Sbjct 182425 CATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCTT 182366 Query 66042 CAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAAT 66101 | || | | || || |||||||| ||| || ||| | | ||| ||||| | Sbjct 182365 CCGGGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAGT 182306 Query 66102 TCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCT 66161 ||| || ||| | || || || |||||||| |||| |||| | ||||| || || | Sbjct 182305 TCTTCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGTTT 182246 Query 66162 CAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCC 66221 | ||| | ||||| |||||||| |||||| | || || | || || | | Sbjct 182245 CTGTTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGATGGTTTGTCTTCCAC 182186 Query 66222 TACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACC-CCATA--CTTCGG 66278 ||||| |||||| |||||| | | || || |||| | ||||| | |||| Sbjct 182185 GACCTTCCTTTTCGTATCTTTCGTACAATTCCTCAAA---TTCATCTCCATAGACGTCGG 182129 Query 66279 ACAGACATGGA----CACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACA 66334 || | ||| |||||| || | | ||| | |||||| |||| ||||||||| Sbjct 182128 CAAGGCCAGGAGCTTCACTTG----GAGAGAACAGGGTCCAATCGCCATTCTGTTCTACT 182073 Query 66335 CGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCC 66394 | ||| || |||||||| ||||| | ||| ||| | || | |||| |||| Sbjct 182072 CTTTTCATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTCC 182013 Query 66395 TCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCC 66454 || | || || || || || | || | ||| |||||||||||||||||||||| ||| Sbjct 182012 TCTTTACCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCC 181953 Query 66455 AGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACA 66514 | ||| | || || | || ||||||| ||||||||||| || || ||||| Sbjct 181952 AAGTACAAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTG 181893 Query 66515 TTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATG 66574 ||||||||||| | || ||| || | | || || || | || || || || | ||| Sbjct 181892 TTGTTGAAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATG 181833 Query 66575 GGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAG 66634 ||||||| || || |||| |||| | || |||||| ||||| || || || ||| Sbjct 181832 TAGGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAG 181773 Query 66635 ATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTC 66694 || |||||| || || || | | ||||| ||||| |||||| || |||| Sbjct 181772 ATTAAAGCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCA 181713 Query 66695 AGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTA 66754 | | | | ||||| | ||| || | || || | || || || || || | Sbjct 181712 ACTAAGAAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAG 181653 Query 66755 GCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTT 66814 || || || || || | || ||| | || || || || || || |||||| Sbjct 181652 GCATGAGTGAAATACTTCTGACTCATAAAGTTATAAGTTTCAATAACTCTTGCAATGTCA 181593 Query 66815 TCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGA 66874 || |||||||| |||| ||| ||||| | | || |||||| ||||| | | | Sbjct 181592 TCACCATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAACATTA 181533 Query 66875 TCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924 | || || || | ||| || | ||||| |||||||| |||||||| Sbjct 181532 CCATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTA 181483 >seq30 Length=426252 Score = 187 bits (206), Expect = 2e-42 Identities = 591/900 (66%), Gaps = 22/900 (2%) Strand=Plus/Minus Query 61025 ATGAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGG 61084 ||||||| || || |||||| |||||||| || | ||||| | |||| | | Sbjct 107002 ATGAACCACTCTTAGTTGAGAATAAACGTCGTTTTGTGCTCTTCCCTTTGAAGTACCACG 106943 Query 61085 ATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATT 61144 |||| |||| |||||||| |||| ||||||||||| ||||| | ||||| | || Sbjct 106942 ATATCTGGCAAATGTACAAGCAGGCCGAAGCTTCCTTTTGGACTGCTGAGGAAATAGACC 106883 Query 61145 TGTCCAAAGACATGAATGACTGGGAGCGTT-TATCGAGCGGT---GAACAACATTTCAT- 61199 || || || || |||||||| | | ||| || || | ||| || ||||| Sbjct 106882 TGGGTAAGGATTTGCATGACTGGAATAATCGTAT-GAACGATAATGAAAAATTCTTCATC 106824 Query 61200 TAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGA 61259 | | | || | || |||||||| || || |||||||| |||||||| || || |||| Sbjct 106823 TCGAGA-GTCCTTGCCTTCTTTGCTGCCTCTGACGGTATTGTCAATGAAAACTTGGTGGA 106765 Query 61260 ACGTTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTG 61318 | |||| | || | |||| ||| | | || || || || ||||| |||||||| Sbjct 106764 AAATTTCAGTGCTG-AGGTTCAACTTCCCGAAGCAAAATGCTTTTACGGTTTCCAGATCA 106706 Query 61319 CCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 |||||||| | ||||| |||| ||| | || || ||||| ||||||| || | Sbjct 106705 TGATGGAGAACATTCACTCCGAGACTTACTCCTTGCTGATTGATACTTACATCAAAGATC 106646 Query 61379 GGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAG 61438 || |||| ||||||||||||||||||| || || | || || | Sbjct 106645 CAAAAGAGTCTGAATTCCTGTTCAATGCCATCGAGACCATTCCATGTATCAAAGAAAAGG 106586 Query 61439 CGGATTGGGCCTTCAATTGGATCACCAGT-ACAACGGCTACATTTGGTGAACGATTGCTG 61497 | || |||||| | | ||||| | | || | | | || | |||||| ||| | Sbjct 106585 CTGACTGGGCCATGAGATGGATTTCTGATGACGATGCATTG-TTCGCTGAACGTTTGGTT 106527 Query 61498 GCATTTGCGGTGGTCGAGGGTGTATT--TTTCAGTGGATCGTTTGCCGCAATCTTTTGGT 61555 || || || | || |||||| | || |||||| |||| ||||| | ||||| |||| Sbjct 106526 GCCTTCGCTGCTGTTGAGGGTATCTTCTTTTCAG--GATCTTTTGCTTCTATCTTCTGGT 106469 Query 61556 TGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACG 61615 ||||||| | || || ||||| ||| |||||||| ||||||| | || | | |||| Sbjct 106468 TGAAGAAGAGAGGTCTCATGCCAGGTTTGACCTTCTCCAATGAGCTTATTTGCAGAGACG 106409 Query 61616 AGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGT 61675 |||| | || ||| |||||| |||||||| | || | ||| | | Sbjct 106408 AGGGATTACACACTGACTTTGCTTGCTTGCTATTTTCTC---ATTTAAACAATAGAGCCA 106352 Query 61676 CGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCG--AACAGGAATTTCT 61733 ||||| || | ||||| | ||||| || |||| || ||| | ||| Sbjct 106351 GTGAGGAAATCGTTGAAAAGATTATCACAGAGGCTGTCGAGATCGAAAAAAGGTACTTC- 106293 Query 61734 GACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATAT 61793 || |||||| | || ||||| | | || ||||| || | | |||| |||||| | Sbjct 106292 -ACAGACGCTCTTCCTGTCTCCTTACTGGGGATGAACTGCAGCTTGATGTGCCAGTATGT 106234 Query 61794 TGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAA 61853 ||| || ||||| ||| | || |||| | | |||| | || | | || || || Sbjct 106233 TGAGTTCGTTGCTGACAGACTACTGGTAGCTCTGGGCAACAAAAAGGTGTACAACGTCAA 106174 Query 61854 AAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913 || |||||||| |||||||| | ||||| ||| || || || || || ||||| || Sbjct 106173 CAATCCATTTGACTTCATGGAGAACATTTCTTTGGCCGGTAAAACCAACTTCTTCGAAAA 106114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567311958880