Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016575.1_202016-02-08] 165 sequences; 9,355,305 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq106 120 5e-25 seq105 120 5e-25 seq138 102 1e-19 >seq106 Length=275 Score = 120 bits (132), Expect = 5e-25 Identities = 114/143 (80%), Gaps = 11/143 (8%) Strand=Plus/Minus Query 92 TCCCCATCACGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCG 151 |||||| ||||| | | | | |||||| ||||| | | || | ||||| ||||| Sbjct 275 TCCCCAGCACGACGGAGTCT--AAGATTCCCCGGCCATCTCTGGCAAGG------ACTCG 224 Query 152 TTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGT 211 || | | |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 223 CTGCCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGACCTGT 164 Query 212 TATTGCCTCAAACTTCCG-TGGC 233 ||||||||| |||||| |||| Sbjct 163 TATTGCCTC--GCTTCCGCTGGC 143 >seq105 Length=275 Score = 120 bits (132), Expect = 5e-25 Identities = 114/143 (80%), Gaps = 11/143 (8%) Strand=Plus/Plus Query 92 TCCCCATCACGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCG 151 |||||| ||||| | | | | |||||| ||||| | | || | ||||| ||||| Sbjct 1 TCCCCAGCACGACGGAGTCT--AAGATTCCCCGGCCATCTCTGGCAAGG------ACTCG 52 Query 152 TTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGT 211 || | | |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 53 CTGCCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGACCTGT 112 Query 212 TATTGCCTCAAACTTCCG-TGGC 233 ||||||||| |||||| |||| Sbjct 113 TATTGCCTC--GCTTCCGCTGGC 133 >seq138 Length=139 Score = 102 bits (112), Expect = 1e-19 Identities = 66/70 (94%), Gaps = 2/70 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||| ||| Sbjct 53 GTACAAAGGGCAGGGACGTAATCAGCGCGAGC-TGATGACTCGCGCTTACTAGGAA-TTC 110 Query 61 CTCGTTGAAG 70 |||||||||| Sbjct 111 CTCGTTGAAG 120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751998797975