Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016585.1_202016-02-08] 196 sequences; 9,355,338 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq67 197 6e-48 seq99 196 2e-47 seq113 143 1e-31 >seq67 Length=333 Score = 197 bits (218), Expect = 6e-48 Identities = 127/138 (92%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 548 TGAGTAAG--AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTG 605 ||||| || |||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct 194 TGAGTGAGCCAGCACCCCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCG 135 Query 606 AAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAA 665 ||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||| | Sbjct 134 AAGCCTGAGGAAACTCTGGTGGAGGCCCGCAGCGGTTCTGACGTGCAAATCGATCGTCGA 75 Query 666 ATTTGGGTATAGGGGCGA 683 |||||||||||||||||| Sbjct 74 ATTTGGGTATAGGGGCGA 57 >seq99 Length=450 Score = 196 bits (216), Expect = 2e-47 Identities = 116/121 (96%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 563 CTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCT 622 ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct 427 CTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCGAAGCCTGAGGAAACTCT 368 Query 623 GGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCG 682 ||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct 367 GGTGGAGGCCCGCAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCG 308 Query 683 A 683 | Sbjct 307 A 307 >seq113 Length=286 Score = 143 bits (158), Expect = 1e-31 Identities = 120/145 (83%), Gaps = 3/145 (2%) Strand=Plus/Minus Query 36 CGAC-GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 |||| ||||||||||||||||||||||||||||||| || |||| | | || || | Sbjct 143 CGACAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAA--GGTGGTAGGGTCCATCAAAGAC 86 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||| || ||||||||||||| ||||||| |||||| ||||||||||||| |||| Sbjct 85 TAAATATCAGCGAGAGACCGATAGCAAACAAGTACAGTGATGGAAAGATGAAAAGAACTT 26 Query 155 TGGAAAGAGAGTTAAAAAGCACGTG 179 || ||||||||| ||| || |||| Sbjct 25 TGAAAAGAGAGTGAAACAGTGCGTG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079995795800