Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016585.1_202016-02-08]
196 sequences; 9,355,338 total letters
Query= AAMG01000383.1
Length=435
Score E
Sequences producing significant alignments: (Bits) Value
seq112 288 3e-75
seq111 156 1e-35
>seq112
Length=299
Score = 288 bits (318), Expect = 3e-75
Identities = 224/267 (84%), Gaps = 0/267 (0%)
Strand=Plus/Plus
Query 80 ACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAA 139
|||||||||||||||| ||||||||||| |||| || ||||||| ||||||||| ||
Sbjct 1 ACTGGGCGTAAAGCGTACGCAGGCGGTTTGTTAAGCGAGATGTGAAAGCCCCGGGCTCAA 60
Query 140 CCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCAC 199
|||||||| ||||||| |||| |||||||| | |||||| ||| ||||| ||
Sbjct 61 CCTGGGAACTGCATTTCGAACTGGCAAACTAGAGTTTTGTAGAGGGTGGTAGAATTTCAG 120
Query 200 GTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGG 259
||||||| |||||||||||||| || || ||||| |||| |||||||||| ||| |||||
Sbjct 121 GTGTAGCGGTGAAATGCGTAGAGATCTGAAGGAATACCAGTGGCGAAGGCGGCCACCTGG 180
Query 260 GATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTA 319
| ||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||
Sbjct 181 ACAATAACTGACGCTCATGTACGAAAGCGTGGGGAGCAAACGGGATTAGATACCCCGGTA 240
Query 320 GTCCACGCCCTAAACGATATCAACTAG 346
||||||||| |||||||| ||||||||
Sbjct 241 GTCCACGCCGTAAACGATGTCAACTAG 267
>seq111
Length=299
Score = 156 bits (172), Expect = 1e-35
Identities = 205/280 (73%), Gaps = 3/280 (1%)
Strand=Plus/Plus
Query 82 TGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAACC 141
|||| ||||| || || |||||| |||| |||| |||||||||| ||| |||
Sbjct 3 TGGGTTTAAAGGGTTCGTAGGCGGACTAATAAGTCAGG-GTGAAATCCCACAGCTCAACT 61
Query 142 TGGGAATTGCATTTGTGACTGCACGACTAGAGTG-TGTCAGAGGGGGGTGGAATTCCACG 200
|||| ||| |||| |||| | || || | ||| || | | | |||| |
Sbjct 62 GTGGAACTGCCTTTGATACTGTTAGTCTTGAATTATGTG-GAAGTAGATAGAATGTGTAG 120
Query 201 TGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGGG 260
|||||| ||||||||| |||| || ||| ||| || |||||||||| | || |
Sbjct 121 TGTAGCGGTGAAATGCTTAGAGATTACACAGAATACCGATTGCGAAGGCAGTCTACTACG 180
Query 261 ATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAG 320
| | ||||||| ||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 181 TATATATTGACGCTAATGAACGAAAGCGTGGGGAGCGAACAGGATTAGATACCCTGGTAG 240
Query 321 TCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTA 360
|||||||| |||||||| ||| ||||||||| |||||
Sbjct 241 TCCACGCCGTAAACGATGGACACTCGTTGTTGGGAATTTA 280
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1289597472384
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |