Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016585.1_202016-02-08] 196 sequences; 9,355,338 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq112 288 3e-75 seq111 156 1e-35 >seq112 Length=299 Score = 288 bits (318), Expect = 3e-75 Identities = 224/267 (84%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 80 ACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAA 139 |||||||||||||||| ||||||||||| |||| || ||||||| ||||||||| || Sbjct 1 ACTGGGCGTAAAGCGTACGCAGGCGGTTTGTTAAGCGAGATGTGAAAGCCCCGGGCTCAA 60 Query 140 CCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCAC 199 |||||||| ||||||| |||| |||||||| | |||||| ||| ||||| || Sbjct 61 CCTGGGAACTGCATTTCGAACTGGCAAACTAGAGTTTTGTAGAGGGTGGTAGAATTTCAG 120 Query 200 GTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGG 259 ||||||| |||||||||||||| || || ||||| |||| |||||||||| ||| ||||| Sbjct 121 GTGTAGCGGTGAAATGCGTAGAGATCTGAAGGAATACCAGTGGCGAAGGCGGCCACCTGG 180 Query 260 GATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTA 319 | ||||||||||||| ||||||||||||||||||||| ||||||||||||| |||| Sbjct 181 ACAATAACTGACGCTCATGTACGAAAGCGTGGGGAGCAAACGGGATTAGATACCCCGGTA 240 Query 320 GTCCACGCCCTAAACGATATCAACTAG 346 ||||||||| |||||||| |||||||| Sbjct 241 GTCCACGCCGTAAACGATGTCAACTAG 267 >seq111 Length=299 Score = 156 bits (172), Expect = 1e-35 Identities = 205/280 (73%), Gaps = 3/280 (1%) Strand=Plus/Plus Query 82 TGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAACC 141 |||| ||||| || || |||||| |||| |||| |||||||||| ||| ||| Sbjct 3 TGGGTTTAAAGGGTTCGTAGGCGGACTAATAAGTCAGG-GTGAAATCCCACAGCTCAACT 61 Query 142 TGGGAATTGCATTTGTGACTGCACGACTAGAGTG-TGTCAGAGGGGGGTGGAATTCCACG 200 |||| ||| |||| |||| | || || | ||| || | | | |||| | Sbjct 62 GTGGAACTGCCTTTGATACTGTTAGTCTTGAATTATGTG-GAAGTAGATAGAATGTGTAG 120 Query 201 TGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGGG 260 |||||| ||||||||| |||| || ||| ||| || |||||||||| | || | Sbjct 121 TGTAGCGGTGAAATGCTTAGAGATTACACAGAATACCGATTGCGAAGGCAGTCTACTACG 180 Query 261 ATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAG 320 | | ||||||| ||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct 181 TATATATTGACGCTAATGAACGAAAGCGTGGGGAGCGAACAGGATTAGATACCCTGGTAG 240 Query 321 TCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTA 360 |||||||| |||||||| ||| ||||||||| ||||| Sbjct 241 TCCACGCCGTAAACGATGGACACTCGTTGTTGGGAATTTA 280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289597472384