Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016585.1_202016-02-08] 196 sequences; 9,355,338 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq145 87.8 3e-15 seq144 87.8 3e-15 >seq145 Length=166 Score = 87.8 bits (96), Expect = 3e-15 Identities = 90/113 (80%), Gaps = 5/113 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | ||| || | |||||||||| ||||| ||||| | |||| Sbjct 118 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 62 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 || ||| ||||| || | ||| ||||||||||||||||||||||||||| Sbjct 61 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 11 >seq144 Length=166 Score = 87.8 bits (96), Expect = 3e-15 Identities = 90/113 (80%), Gaps = 5/113 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | ||| || | |||||||||| ||||| ||||| | |||| Sbjct 118 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 62 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 || ||| ||||| || | ||| ||||||||||||||||||||||||||| Sbjct 61 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 11 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819198444544