Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016595.1_202016-02-08] 207 sequences; 9,358,152 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq60 197 6e-48 seq112 152 2e-34 seq133 86.0 3e-14 >seq60 Length=948 Score = 197 bits (218), Expect = 6e-48 Identities = 127/138 (92%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 548 TGAGTAAG--AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTG 605 ||||| || |||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct 148 TGAGTGAGCCAGCACCCCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCG 207 Query 606 AAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAA 665 ||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||| | Sbjct 208 AAGCCTGAGGAAACTCTGGTGGAGGCCCGCAGCGGTTCTGACGTGCAAATCGATCGTCGA 267 Query 666 ATTTGGGTATAGGGGCGA 683 |||||||||||||||||| Sbjct 268 ATTTGGGTATAGGGGCGA 285 >seq112 Length=292 Score = 152 bits (168), Expect = 2e-34 Identities = 95/102 (93%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 582 GGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGT 641 ||||||||||||||||| |||| |||||| |||||||||||||||||||| ||||||||| Sbjct 292 GGTGAACTATGCCTGAAAAGGGCGAAGCCTGAGGAAACTCTGGTGGAGGCCCGCAGCGGT 233 Query 642 TCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||| ||||||||||||||||| ||| ||||||||||||||| Sbjct 232 TCTGACGTGCAAATCGATCGTCGAATGTGGGTATAGGGGCGA 191 >seq133 Length=210 Score = 86.0 bits (94), Expect = 3e-14 Identities = 76/93 (82%), Gaps = 3/93 (3%) Strand=Plus/Minus Query 36 CGAC-GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 |||| ||||||||||||||||||||||||||||||| || |||| | | || || | Sbjct 91 CGACAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAA--GGTGGTAGGGTCCATCAAAGAC 34 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGT 127 ||||||| || ||||||||||||| |||||| Sbjct 33 TAAATATCAGCGAGAGACCGATAGCAAACAAGT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079995559850