Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016595.1_202016-02-08]
207 sequences; 9,358,152 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq60 197 6e-48
seq112 152 2e-34
seq133 86.0 3e-14
>seq60
Length=948
Score = 197 bits (218), Expect = 6e-48
Identities = 127/138 (92%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 548 TGAGTAAG--AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTG 605
||||| || |||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 148 TGAGTGAGCCAGCACCCCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCG 207
Query 606 AAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAA 665
||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||| |
Sbjct 208 AAGCCTGAGGAAACTCTGGTGGAGGCCCGCAGCGGTTCTGACGTGCAAATCGATCGTCGA 267
Query 666 ATTTGGGTATAGGGGCGA 683
||||||||||||||||||
Sbjct 268 ATTTGGGTATAGGGGCGA 285
>seq112
Length=292
Score = 152 bits (168), Expect = 2e-34
Identities = 95/102 (93%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 582 GGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGT 641
||||||||||||||||| |||| |||||| |||||||||||||||||||| |||||||||
Sbjct 292 GGTGAACTATGCCTGAAAAGGGCGAAGCCTGAGGAAACTCTGGTGGAGGCCCGCAGCGGT 233
Query 642 TCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||| ||||||||||||||||| ||| |||||||||||||||
Sbjct 232 TCTGACGTGCAAATCGATCGTCGAATGTGGGTATAGGGGCGA 191
>seq133
Length=210
Score = 86.0 bits (94), Expect = 3e-14
Identities = 76/93 (82%), Gaps = 3/93 (3%)
Strand=Plus/Minus
Query 36 CGAC-GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
|||| ||||||||||||||||||||||||||||||| || |||| | | || || |
Sbjct 91 CGACAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAA--GGTGGTAGGGTCCATCAAAGAC 34
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGT 127
||||||| || ||||||||||||| ||||||
Sbjct 33 TAAATATCAGCGAGAGACCGATAGCAAACAAGT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079995559850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |