Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016595.1_202016-02-08] 207 sequences; 9,358,152 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq52 73.4 4e-11 >seq52 Length=4798 Score = 73.4 bits (80), Expect = 4e-11 Identities = 100/144 (69%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 ||||||| ||||| | | |||| |||||||||||||| | | ||||||||||| | Sbjct 553 GGGTCTTCTCGTCTTACTTCAGGTACACGGCATCTTCACCGCGAATTCAATTTCACTGGG 494 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 || |||||| |||| ||| |||||| |||||| | | ||| | Sbjct 493 CTTCTGGTTGATACAGTTATTATATCGTTACTCCATTCATGCAGGACTATATTTAGTAGC 434 Query 145 CAAGGAATTTCGCTACCTTAGGAC 168 ||| |||||||||||| ||| ||| Sbjct 433 CAATGAATTTCGCTACATTATGAC 410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547198902693