Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016605.1_202016-02-08]
180 sequences; 9,359,306 total letters
Query= AAMG01000383.1
Length=435
Score E
Sequences producing significant alignments: (Bits) Value
seq111 271 2e-70
seq141 212 2e-52
seq118 203 8e-50
seq177 125 2e-26
>seq111
Length=269
Score = 271 bits (300), Expect = 2e-70
Identities = 221/267 (83%), Gaps = 1/267 (0%)
Strand=Plus/Plus
Query 80 ACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAA 139
|||||| ||||||||| ||||||||||| |||| || ||||||| ||| ||||| ||
Sbjct 1 ACTGGGTGTAAAGCGTACGCAGGCGGTTTGTTAAGCAAGATGTGAAAGCCCAGGGCTCAA 60
Query 140 CCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCAC 199
||| |||| ||||||| |||| |||||||| | |||||| ||| ||||| ||
Sbjct 61 CCTTGGAACTGCATTTCGAACTGGCAAACTAGAGTTTTGTAGAGGGTGGTAGAATTTCAG 120
Query 200 GTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGG 259
||||||| |||||||||||||| || || ||||| |||| |||||||||| ||| ||| |
Sbjct 121 GTGTAGCGGTGAAATGCGTAGAGATCTGAAGGAATACCAGTGGCGAAGGCGGCCACCT-G 179
Query 260 GATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTA 319
|| || ||||||||| | | ||||||||||||||||||||| ||||||||||||| ||||
Sbjct 180 GACAATACTGACGCTGAGGTACGAAAGCGTGGGGAGCAAACGGGATTAGATACCCCGGTA 239
Query 320 GTCCACGCCCTAAACGATATCAACTAG 346
||||||||| |||||||| ||||||||
Sbjct 240 GTCCACGCCGTAAACGATGTCAACTAG 266
>seq141
Length=157
Score = 212 bits (234), Expect = 2e-52
Identities = 138/152 (91%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6 TACCGTAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 65
Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122
||||||||||||||||||||||||||||||| ||| ||| |||| |||| | | |||
Sbjct 66 GAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTAGGTGGTTCGTTAAGTCGGATGT 125
Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATT 154
|||||||||||||| |||||||||| ||||||
Sbjct 126 GAAATCCCCGGGCTCAACCTGGGAACTGCATT 157
>seq118
Length=222
Score = 203 bits (224), Expect = 8e-50
Identities = 158/187 (84%), Gaps = 1/187 (1%)
Strand=Plus/Plus
Query 168 CTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTG 227
||||||| || |||||| | ||||||| | ||||||| ||||||||||||||||| |
Sbjct 13 CTAGAGTATGGTAGAGGGTG-TGGAATTTCCTGTGTAGCGGTGAAATGCGTAGATATAGG 71
Query 228 GAGGAACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGC 287
|||||||||| |||||||||| || ||||| || ||||||||| | || |||||||
Sbjct 72 AAGGAACACCAGTGGCGAAGGCGACCACCTGGACCAATACTGACGCTGAGGCGCGAAAGC 131
Query 288 GTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGT 347
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 132 GTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGTCAACTAGC 191
Query 348 TGTTGGG 354
| ||||
Sbjct 192 CGGTGGG 198
>seq177
Length=103
Score = 125 bits (138), Expect = 2e-26
Identities = 91/104 (88%), Gaps = 1/104 (1%)
Strand=Plus/Minus
Query 156 GTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATG 215
||||||| | | |||||||| | |||||||| ||||||||| ||||||||||||||||
Sbjct 103 GTGACTGGAAGGCTAGAGTGCGGTAGAGGGGGATGGAATTCCG-GTGTAGCAGTGAAATG 45
Query 216 CGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGG 259
|||||||||| ||||||||||| |||||||||||| |||||||
Sbjct 44 CGTAGATATGCGGAGGAACACCGATGGCGAAGGCAATCCCCTGG 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1289597678720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |