Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016605.1_202016-02-08]
180 sequences; 9,359,306 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq128 185 3e-44
seq121 147 7e-33
>seq128
Length=185
Score = 185 bits (204), Expect = 3e-44
Identities = 141/164 (86%), Gaps = 6/164 (4%)
Strand=Plus/Minus
Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60
|||| |||||||||| ||||||||| |||||||||||| |||||||||||||||||||||
Sbjct 161 TACGGCCGCAAGGTTAAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 102
Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120
|||||||||||||||||||||||||||||||||||| |||||||||| ||| | ||
Sbjct 101 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAGGCCTTGACATCCAATGAACTTTC 42
Query 121 TAGAGATAGA--GGTTTCCCCTTCGGGGGACAGAGTGACAGGTG 162
|||||||||| ||| ||||| ||| ||| | ||||||||
Sbjct 41 TAGAGATAGATTGGT---GCCTTC-GGGAACATTGAGACAGGTG 2
>seq121
Length=195
Score = 147 bits (162), Expect = 7e-33
Identities = 93/101 (92%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66
|||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 155 CGCAAGAGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTT 96
Query 67 TAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACAT 107
|||||||| ||||||||||||||||||||| |||||||
Sbjct 95 TAATTCGATGCAACGCGAAGAACCTTACCAGGGTTTGACAT 55
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1503997292800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |