Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016605.1_202016-02-08]
180 sequences; 9,359,306 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq37 347 2e-93
seq117 78.8 2e-12
>seq37
Length=509
Score = 347 bits (384), Expect = 2e-93
Identities = 218/234 (93%), Gaps = 7/234 (3%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTAC--CATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCT 58
||||||| |||||| | |||||| ||||||||||||||||||||||||||||
Sbjct 229 TACTAAGTTCAATTACTGCCGTGGGGC-----TCATCAGTAGGGTAAAACTAACCTGTCT 175
Query 59 CATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACC 118
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 174 CACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACC 115
Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178
|||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct 114 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGAATCAAAAAGCAATGTCGCT 55
Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACC 232
||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 54 ATGAACGCTTGACTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACC 1
>seq117
Length=227
Score = 78.8 bits (86), Expect = 2e-12
Identities = 54/61 (89%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 235 TAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294
|||||||| | ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 227 TAGCCTCAGGGTCTGAGGGTGTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 168
Query 295 C 295
|
Sbjct 167 C 167
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854398462080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |