Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016605.1_202016-02-08] 180 sequences; 9,359,306 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq141 134 2e-29 seq111 129 1e-27 seq118 127 3e-27 seq177 86.0 1e-14 >seq141 Length=157 Score = 134 bits (148), Expect = 2e-29 Identities = 113/139 (81%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 152 GGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCCTACACGCCCTTTACACCCA 211 |||||||||| | ||||||||| ||||| | || ||||| ||| |||||| |||| Sbjct 144 GGTTGAGCCCGGGGATTTCACATCCGACTTAACGAACCACCTACGCGCGCTTTACGCCCA 85 Query 212 ATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCC 271 ||| |||| ||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct 84 GTAATTCCGATTAACGCTCGCACCCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCC 25 Query 272 GTGGCTTATTCCTCAGGTA 290 | |||||||| | |||| Sbjct 24 GGTGCTTATTCTTACGGTA 6 >seq111 Length=269 Score = 129 bits (142), Expect = 1e-27 Identities = 156/211 (74%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||||||||||| ||||||||||||| | ||||||| ||||||||||||||||| | Sbjct 212 CCCACGCTTTCGTACCTCAGCGTCAGT-ATTGTCCAGGTGGCCGCCTTCGCCACTGGTAT 154 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||| | || |||||||||||||||||||||| | ||||| ||||| || || Sbjct 153 TCCTTCAGATCTCTACGCATTTCACCGCTACACCTGAAATTCTACCACCCTCTACAAAAC 94 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || ||||| |||||||| |||||||||| | |||||||||| || Sbjct 93 TCTAGTTTGCCAGTTCGAAATGCAGTTCCAAGGTTGAGCCCTGGGCTTTCACATCTTGCT 34 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCA 211 | | |||||| | | ||||||||||| Sbjct 33 TAACAAACCGCCTGCGTACGCTTTACACCCA 3 >seq118 Length=222 Score = 127 bits (140), Expect = 3e-27 Identities = 90/103 (87%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct 136 CCCACGCTTTCGCGCCTCAGCGTCAGTATTGGTCCAGGTGGTCGCCTTCGCCACTGGTGT 77 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCC 103 |||| | ||||||||||||||||||||||||||| | |||||| Sbjct 76 TCCTTCCTATATCTACGCATTTCACCGCTACACAGGAAATTCC 34 >seq177 Length=103 Score = 86.0 bits (94), Expect = 1e-14 Identities = 69/82 (84%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 44 GCCTTCGCCACTGGTGTTCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCC 103 |||||||||| |||||||||||| ||||||||||||||||| ||||||| ||||||||| Sbjct 11 GCCTTCGCCATCGGTGTTCCTCCGCATATCTACGCATTTCACTGCTACAC-CGGAATTCC 69 Query 104 GATTGCCTCTCCAGCACTCAAG 125 ||||| | |||||| || Sbjct 70 ATCCCCCTCTACCGCACTCTAG 91 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828798554780