Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016605.1_202016-02-08] 180 sequences; 9,359,306 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq36 414 3e-113 seq117 138 4e-30 >seq36 Length=826 Score = 414 bits (458), Expect = 3e-113 Identities = 237/241 (98%), Gaps = 1/241 (0%) Strand=Plus/Minus Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTT 339 ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct 808 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGACGC-GCCAAGCCCGTTCCCTT 750 Query 340 GGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGC 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 749 GGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGC 690 Query 400 GCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGC 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 689 GCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGC 630 Query 460 CGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATC 519 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 629 CGTTTACCCGCGCTTGGATGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATC 570 Query 520 A 520 | Sbjct 569 A 569 >seq117 Length=227 Score = 138 bits (152), Expect = 4e-30 Identities = 90/99 (91%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||| | | ||||||||||||| |||||| ||||||| ||||| |||||||||| Sbjct 135 CTTTTGCTCGGCTGAAGATTTCTGTTCTTCATGAGCCCCCCTTGGGACATCTGCGTTATG 76 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTG 105 |||||||||||||||||||||||||||||||||| |||| Sbjct 75 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCGCCTG 37 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635197056640