Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016605.1_202016-02-08]
180 sequences; 9,359,306 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq33 574 1e-161
>seq33
Length=1706
Score = 574 bits (636), Expect = 1e-161
Identities = 432/504 (86%), Gaps = 48/504 (10%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||
Sbjct 1131 GTACTCATTCCAATTACAAGACC--AAAG-GCCCTGTATCGTTATTTATTGTCACTACCT 1075
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1074 CCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTC 1015
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
|||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||
Sbjct 1014 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTAGAAACCATGGTA 955
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 954 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATC-----CT 900
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
| |||||| |||||||||||||||||||| ||||||
Sbjct 899 AA---------GATTCGAAAAGTTATTATGAATCACCAA-----AACGAAGG-------- 862
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
||||||||||||||||| | |||| ||| | | || |||||||||||||
Sbjct 861 -TTTTATCTAATAAATACGC-----CCGA----GGG---CTGATCAAGTATTAGCTCTAG 815
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||
Sbjct 814 AATTACCACGGTTATCCTTGTAGCAA--CACTATCAAATAAACGATAACTGATTTAATGA 757
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480
||||||||||||||||| |||| | ||| ||||||||||||||||||||||||||||||
Sbjct 756 GCCATTCGCAGTTTCACCGTAT--AATGC-TATACTTAGACATGCATGGCTTAATCTTTG 700
Query 481 AGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||
Sbjct 699 AGACAAGCATATGACTACTGGCAG 676
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510397281280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |