Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016615.1_202016-02-08]
170 sequences; 9,355,931 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq24 253 3e-65
>seq24
Length=867
Score = 253 bits (280), Expect = 3e-65
Identities = 214/257 (83%), Gaps = 7/257 (3%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 370 ACTCGCTGCCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 311
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||| ||||| ||||| | |||| | |||| ||||||||| | ||
Sbjct 310 CCTGTTATTGCCTCG--CTTCCGCTGGCTTGC-GCCAGTTGTCCTTCTAAGAAG--ATCC 256
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
||| | || | | ||| ||| || ||||||||||||||||||| ||||||
Sbjct 255 CCCAGCAATGCCAGGTAAC-CTAGTTAAAAGCC-AAGGTCTCGTTCGTTATCGCAATTAA 198
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 197 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAA 138
Query 242 AGAGCTATCAATCTGTC 258
|| ||| ||| |||||
Sbjct 137 AGTGCTCTCATCCTGTC 121
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796798687770
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |