Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016615.1_202016-02-08] 170 sequences; 9,355,931 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq140 235 2e-59 seq118 178 4e-42 seq26 138 4e-30 >seq140 Length=159 Score = 235 bits (260), Expect = 2e-59 Identities = 137/140 (98%), Gaps = 1/140 (1%) Strand=Plus/Minus Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTT 339 ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct 139 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGACGC-GCCAAGCCCGTTCCCTT 81 Query 340 GGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGC 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 80 GGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGC 21 Query 400 GCGTCACTAATTAGATGACG 419 |||||||||||||||||||| Sbjct 20 GCGTCACTAATTAGATGACG 1 >seq118 Length=306 Score = 178 bits (196), Expect = 4e-42 Identities = 100/101 (99%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 420 AGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTG 479 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 306 AGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGATG 247 Query 480 AATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520 ||||||||||||||||||||||||||||||||||||||||| Sbjct 246 AATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 206 >seq26 Length=781 Score = 138 bits (152), Expect = 4e-30 Identities = 90/99 (91%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||| | | ||||||||||||| |||||| ||||||| ||||| |||||||||| Sbjct 181 CTTTTGCTCGGCTGAAGATTTCTGTTCTTCATGAGCCCCCCTTGGGACATCTGCGTTATG 122 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTG 105 |||||||||||||||||||||||||||||||||| |||| Sbjct 121 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCGCCTG 83 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635197220160