Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016615.1_202016-02-08]
170 sequences; 9,355,931 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq140 235 2e-59
seq118 178 4e-42
seq26 138 4e-30
>seq140
Length=159
Score = 235 bits (260), Expect = 2e-59
Identities = 137/140 (98%), Gaps = 1/140 (1%)
Strand=Plus/Minus
Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTT 339
||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct 139 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGACGC-GCCAAGCCCGTTCCCTT 81
Query 340 GGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGC 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 80 GGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGC 21
Query 400 GCGTCACTAATTAGATGACG 419
||||||||||||||||||||
Sbjct 20 GCGTCACTAATTAGATGACG 1
>seq118
Length=306
Score = 178 bits (196), Expect = 4e-42
Identities = 100/101 (99%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 420 AGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTG 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 306 AGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGATG 247
Query 480 AATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520
|||||||||||||||||||||||||||||||||||||||||
Sbjct 246 AATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 206
>seq26
Length=781
Score = 138 bits (152), Expect = 4e-30
Identities = 90/99 (91%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||||||||| | | ||||||||||||| |||||| ||||||| ||||| ||||||||||
Sbjct 181 CTTTTGCTCGGCTGAAGATTTCTGTTCTTCATGAGCCCCCCTTGGGACATCTGCGTTATG 122
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTG 105
|||||||||||||||||||||||||||||||||| ||||
Sbjct 121 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCGCCTG 83
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635197220160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |