Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20phaffii_20[genbank_20GCA_5F001708085.1_202016-08-12]
7 sequences; 9,397,609 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq7 215 8e-54
seq1 215 8e-54
seq3 206 4e-51
seq6 199 6e-49
>seq7
Length=11027
Score = 215 bits (238), Expect = 8e-54
Identities = 192/234 (82%), Gaps = 15/234 (6%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||| |
Sbjct 10776 GTACAAAGGGCAGGGACGTAATCAGCGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 10833
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
|||||||||| | | |||||| | ||||||||| ||||| | | | | ||||||
Sbjct 10834 CTCGTTGAAGCGCCTC--TTGCAAAGCGCTATCCCCAGCACGACGGAGTCT--AAGATTC 10889
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||||| | | || | ||||| ||||| || | | ||||||||||||||||||||
Sbjct 10890 CCCGGCCATCTCTGGCAAGG------ACTCGCTGCCTCCGTCAGTGTAGCGCGCGTGCGG 10943
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCG-TGGC 233
|||||||| ||||||||||||||||||||||||||||||| |||||| ||||
Sbjct 10944 CCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTC--GCTTCCGCTGGC 10995
Score = 205 bits (226), Expect = 1e-50
Identities = 190/234 (81%), Gaps = 18/234 (8%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||| |
Sbjct 3760 GTACAAAGGGCAGGGACGTAATCAGCGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 3817
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
|||||||||| | | |||||| | ||||||||| ||||| | | | | ||||||
Sbjct 3818 CTCGTTGAAGCGCCTC--TTGCAAAGCGCTATCCCCAGCACGACGGAGTCT--AAGATTC 3873
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||| | | || | ||||| ||||| || | | ||||||||||||||||||||
Sbjct 3874 CCC---CATCTCTGGCAAGG------ACTCGCTGCCTCCGTCAGTGTAGCGCGCGTGCGG 3924
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCG-TGGC 233
|||||||| ||||||||||||||||||||||||||||||| |||||| ||||
Sbjct 3925 CCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTC--GCTTCCGCTGGC 3976
>seq1
Length=2891404
Score = 215 bits (238), Expect = 8e-54
Identities = 192/234 (82%), Gaps = 15/234 (6%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||| |
Sbjct 2890730 GTACAAAGGGCAGGGACGTAATCAGCGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 2890787
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
|||||||||| | | |||||| | ||||||||| ||||| | | | | ||||||
Sbjct 2890788 CTCGTTGAAGCGCCTC--TTGCAAAGCGCTATCCCCAGCACGACGGAGTCT--AAGATTC 2890843
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||||| | | || | ||||| ||||| || | | ||||||||||||||||||||
Sbjct 2890844 CCCGGCCATCTCTGGCAAGG------ACTCGCTGCCTCCGTCAGTGTAGCGCGCGTGCGG 2890897
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCG-TGGC 233
|||||||| ||||||||||||||||||||||||||||||| |||||| ||||
Sbjct 2890898 CCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTC--GCTTCCGCTGGC 2890949
>seq3
Length=2260675
Score = 206 bits (228), Expect = 4e-51
Identities = 191/234 (82%), Gaps = 16/234 (7%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||| |
Sbjct 1958 GTACAAAGGGCAGGGACGTAATCAGCGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 1901
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
|||||||||| | | |||||| | ||||||||| ||||| | | | | ||||||
Sbjct 1900 CTCGTTGAAGCGCCTC--TTGCAAAGCGCTATCCCCAGCACGACGGAGTCT--AAGATTC 1845
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||||| | | || | ||||| ||||| || | | ||||||||||||||||||||
Sbjct 1844 CCCGGCCATCTCTGGCAAGG------ACTCGCTGCCTCCGTCAGTGTAGCGCGCGTGCGG 1791
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCG-TGGC 233
|||||||| ||||| ||||||||||||||||||||||||| |||||| ||||
Sbjct 1790 CCCAGAACGTCTAA-GGCATCACAGACCTGTTATTGCCTC--GCTTCCGCTGGC 1740
>seq6
Length=11416
Score = 199 bits (220), Expect = 6e-49
Identities = 190/234 (81%), Gaps = 18/234 (8%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||| |
Sbjct 6402 GTACAAAGGGCAGGGACGTAATCAGCGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 6459
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
|||||||||| | | |||||| | ||||||||| ||||| | | | | ||||||
Sbjct 6460 CTCGTTGAAGCGCCTC--TTGCAAAGCGCTATCCCCAGCACGACGGAGTCT--AAGATT- 6514
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||||| | | || | ||||| ||||| || | | ||||||||||||||| |||
Sbjct 6515 CCCGGCCATCTCTGGCAAGG------ACTCGCTGCCTCCGTCAGTGTAGCGCGCG--CGG 6566
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCG-TGGC 233
|||||||| ||||||||||||||||||||||||||||||| |||||| ||||
Sbjct 6567 CCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTC--GCTTCCGCTGGC 6618
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751999949005
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |