Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20phaffii_20[genbank_20GCA_5F001708085.1_202016-08-12] 7 sequences; 9,397,609 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq7 125 4e-27 seq6 125 4e-27 seq3 125 4e-27 seq1 125 4e-27 >seq7 Length=11027 Score = 125 bits (138), Expect = 4e-27 Identities = 97/117 (83%), Gaps = 10/117 (9%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||||||||||||||||||||| | || | || ||| Sbjct 4268 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGGGGAAGGC----------TATTCCCC 4317 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||| Sbjct 4318 GATCCCTAGTCGGCATCGTTTATGGTTAAGACTACGACGGTATCTGATCATCTTCGA 4374 >seq6 Length=11416 Score = 125 bits (138), Expect = 4e-27 Identities = 97/117 (83%), Gaps = 10/117 (9%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||||||||||||||||||||| | || | || ||| Sbjct 6904 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGGGGAAGGC----------TATTCCCC 6953 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||| Sbjct 6954 GATCCCTAGTCGGCATCGTTTATGGTTAAGACTACGACGGTATCTGATCATCTTCGA 7010 >seq3 Length=2260675 Score = 125 bits (138), Expect = 4e-27 Identities = 97/117 (83%), Gaps = 10/117 (9%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||||||||||||||||||||| | || | || ||| Sbjct 1448 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGGGGAAGGC----------TATTCCCC 1399 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||| Sbjct 1398 GATCCCTAGTCGGCATCGTTTATGGTTAAGACTACGACGGTATCTGATCATCTTCGA 1342 >seq1 Length=2891404 Score = 125 bits (138), Expect = 4e-27 Identities = 97/117 (83%), Gaps = 10/117 (9%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||||||||||||||||||||| | || | || ||| Sbjct 2891241 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGGGGAAGGC----------TATTCCCC 2891290 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||| Sbjct 2891291 GATCCCTAGTCGGCATCGTTTATGGTTAAGACTACGACGGTATCTGATCATCTTCGA 2891347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278399981730