Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20phaffii_20[genbank_20GCA_5F001708085.1_202016-08-12]
7 sequences; 9,397,609 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq7 125 4e-27
seq6 125 4e-27
seq3 125 4e-27
seq1 125 4e-27
>seq7
Length=11027
Score = 125 bits (138), Expect = 4e-27
Identities = 97/117 (83%), Gaps = 10/117 (9%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||||||||||||||||||||| | || | || |||
Sbjct 4268 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGGGGAAGGC----------TATTCCCC 4317
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||
Sbjct 4318 GATCCCTAGTCGGCATCGTTTATGGTTAAGACTACGACGGTATCTGATCATCTTCGA 4374
>seq6
Length=11416
Score = 125 bits (138), Expect = 4e-27
Identities = 97/117 (83%), Gaps = 10/117 (9%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||||||||||||||||||||| | || | || |||
Sbjct 6904 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGGGGAAGGC----------TATTCCCC 6953
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||
Sbjct 6954 GATCCCTAGTCGGCATCGTTTATGGTTAAGACTACGACGGTATCTGATCATCTTCGA 7010
>seq3
Length=2260675
Score = 125 bits (138), Expect = 4e-27
Identities = 97/117 (83%), Gaps = 10/117 (9%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||||||||||||||||||||| | || | || |||
Sbjct 1448 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGGGGAAGGC----------TATTCCCC 1399
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||
Sbjct 1398 GATCCCTAGTCGGCATCGTTTATGGTTAAGACTACGACGGTATCTGATCATCTTCGA 1342
>seq1
Length=2891404
Score = 125 bits (138), Expect = 4e-27
Identities = 97/117 (83%), Gaps = 10/117 (9%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||||||||||||||||||||| | || | || |||
Sbjct 2891241 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGGGGAAGGC----------TATTCCCC 2891290
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||
Sbjct 2891291 GATCCCTAGTCGGCATCGTTTATGGTTAAGACTACGACGGTATCTGATCATCTTCGA 2891347
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278399981730
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |