Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20phaffii_20[genbank_20GCA_5F001708085.1_202016-08-12]
7 sequences; 9,397,609 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq7 223 6e-56
seq6 219 8e-55
seq3 219 8e-55
seq1 77.0 6e-12
>seq7
Length=11027
Score = 223 bits (246), Expect = 6e-56
Identities = 199/244 (82%), Gaps = 13/244 (5%)
Strand=Plus/Minus
Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAA 134
||||||||| |||||||||||||||| |||| || ||||| ||||||||||||
Sbjct 4606 TTACTTTGAGGAAATTAGAGTGTTCAAGGCAGTAGTT-----GAATATATTAGCATGGAA 4552
Query 135 TAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAAT 194
||| |||| |||| | ||||||| |||||||||| || |||| |||||||||||
Sbjct 4551 TAACAGAAGAGGA--TACGGTTCT--TTTGTTGGTTCG--GGGCCGC-GTAATGATTAAC 4499
Query 195 AGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAA 254
||||| |||||||| ||||||||| |||||||||||||||||||||| ||
Sbjct 4498 AGGGACGGTCGGGGGCGTCAGTATTGGGGCGTCAGAGGTGAAATTCTTGGATCGCCCCAA 4439
Query 255 GACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTA 314
||||||||||||||||||| ||| ||||||| |||||||||||||| ||||||||||||
Sbjct 4438 GACTAACTACTGCGAAAGCATTCGCCAAGGACGTTTTCATTAATCA-AGAACGAAAGTTA 4380
Query 315 GGGG 318
||||
Sbjct 4379 GGGG 4376
>seq6
Length=11416
Score = 219 bits (242), Expect = 8e-55
Identities = 197/242 (81%), Gaps = 13/242 (5%)
Strand=Plus/Minus
Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAA 134
||||||||| |||||||||||||||| |||| || ||||| ||||||||||||
Sbjct 229 TTACTTTGAGGAAATTAGAGTGTTCAAGGCAGTAGTT-----GAATATATTAGCATGGAA 175
Query 135 TAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAAT 194
||| |||| |||| | ||||||| |||||||||| || |||| |||||||||||
Sbjct 174 TAACAGAAGAGGA--TACGGTTCT--TTTGTTGGTTCG--GGGCCGC-GTAATGATTAAC 122
Query 195 AGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAA 254
||||| |||||||| ||||||||| |||||||||||||||||||||| ||
Sbjct 121 AGGGACGGTCGGGGGCGTCAGTATTGGGGCGTCAGAGGTGAAATTCTTGGATCGCCCCAA 62
Query 255 GACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTA 314
||||||||||||||||||| ||| ||||||| |||||||||||||| ||||||||||||
Sbjct 61 GACTAACTACTGCGAAAGCATTCGCCAAGGACGTTTTCATTAATCA-AGAACGAAAGTTA 3
Query 315 GG 316
||
Sbjct 2 GG 1
Score = 210 bits (232), Expect = 4e-52
Identities = 197/243 (81%), Gaps = 16/243 (7%)
Strand=Plus/Minus
Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAA 134
||||||||| |||||||||||||||| |||| || ||||| ||||||||||||
Sbjct 7238 TTACTTTGAGGAAATTAGAGTGTTCAAGGCAGTAGTT-----GAATATATTAGCATGGAA 7184
Query 135 TAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAAT 194
||| |||| |||| | ||||||| |||||||||| || |||| |||||||||||
Sbjct 7183 TAACAGAAGAGGA--TACGGTTCT--TTTGTTGGTTC---GGGCCGC-GTAATGATTAAC 7132
Query 195 AGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAA 254
||||| |||||||| ||||||||| ||||||| |||||||||||||| ||
Sbjct 7131 AGGGACGGTCGGGGGCGTCAGTATTGGGC-GTCAGAG-TGAAATTCTTGGATCGCCCCAA 7074
Query 255 GACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTA 314
||||||||||||||||||| ||| ||||||| |||||||||||||| ||||||||||||
Sbjct 7073 GACTAACTACTGCGAAAGCATTCGCCAAGGACGTTTTCATTAATCA-AGAACGAAAGTTA 7015
Query 315 GGG 317
|||
Sbjct 7014 GGG 7012
>seq3
Length=2260675
Score = 219 bits (242), Expect = 8e-55
Identities = 199/244 (82%), Gaps = 14/244 (6%)
Strand=Plus/Plus
Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAA 134
||||||||| ||| ||||||||||||| |||| || ||||| ||||||||||||
Sbjct 1111 TTACTTTGAGAAA-TTAGAGTGTTCAAGGCAGTAGTT-----GAATATATTAGCATGGAA 1164
Query 135 TAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAAT 194
||| |||| |||| | ||||||| |||||||||| || |||| |||||||||||
Sbjct 1165 TAACAGAAGAGGA--TACGGTTCT--TTTGTTGGTTCG--GGGCCGC-GTAATGATTAAC 1217
Query 195 AGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAA 254
||||| |||||||| ||||||||| |||||||||||||||||||||| ||
Sbjct 1218 AGGGACGGTCGGGGGCGTCAGTATTGGGGCGTCAGAGGTGAAATTCTTGGATCGCCCCAA 1277
Query 255 GACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTA 314
||||||||||||||||||| ||| ||||||| |||||||||||||| ||||||||||||
Sbjct 1278 GACTAACTACTGCGAAAGCATTCGCCAAGGACGTTTTCATTAATCA-AGAACGAAAGTTA 1336
Query 315 GGGG 318
||||
Sbjct 1337 GGGG 1340
>seq1
Length=2891404
Score = 77.0 bits (84), Expect = 6e-12
Identities = 52/57 (91%), Gaps = 1/57 (2%)
Strand=Plus/Minus
Query 262 TACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
|||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||||
Sbjct 2891404 TACTGCGAAAGCATTCGCCAAGGACGTTTTCATTAATCA-AGAACGAAAGTTAGGGG 2891349
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915199935936
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |