Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20phaffii_20[genbank_20GCA_5F001708085.1_202016-08-12] 7 sequences; 9,397,609 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq7 223 6e-56 seq6 219 8e-55 seq3 219 8e-55 seq1 77.0 6e-12 >seq7 Length=11027 Score = 223 bits (246), Expect = 6e-56 Identities = 199/244 (82%), Gaps = 13/244 (5%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAA 134 ||||||||| |||||||||||||||| |||| || ||||| |||||||||||| Sbjct 4606 TTACTTTGAGGAAATTAGAGTGTTCAAGGCAGTAGTT-----GAATATATTAGCATGGAA 4552 Query 135 TAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAAT 194 ||| |||| |||| | ||||||| |||||||||| || |||| ||||||||||| Sbjct 4551 TAACAGAAGAGGA--TACGGTTCT--TTTGTTGGTTCG--GGGCCGC-GTAATGATTAAC 4499 Query 195 AGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAA 254 ||||| |||||||| ||||||||| |||||||||||||||||||||| || Sbjct 4498 AGGGACGGTCGGGGGCGTCAGTATTGGGGCGTCAGAGGTGAAATTCTTGGATCGCCCCAA 4439 Query 255 GACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTA 314 ||||||||||||||||||| ||| ||||||| |||||||||||||| |||||||||||| Sbjct 4438 GACTAACTACTGCGAAAGCATTCGCCAAGGACGTTTTCATTAATCA-AGAACGAAAGTTA 4380 Query 315 GGGG 318 |||| Sbjct 4379 GGGG 4376 >seq6 Length=11416 Score = 219 bits (242), Expect = 8e-55 Identities = 197/242 (81%), Gaps = 13/242 (5%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAA 134 ||||||||| |||||||||||||||| |||| || ||||| |||||||||||| Sbjct 229 TTACTTTGAGGAAATTAGAGTGTTCAAGGCAGTAGTT-----GAATATATTAGCATGGAA 175 Query 135 TAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAAT 194 ||| |||| |||| | ||||||| |||||||||| || |||| ||||||||||| Sbjct 174 TAACAGAAGAGGA--TACGGTTCT--TTTGTTGGTTCG--GGGCCGC-GTAATGATTAAC 122 Query 195 AGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAA 254 ||||| |||||||| ||||||||| |||||||||||||||||||||| || Sbjct 121 AGGGACGGTCGGGGGCGTCAGTATTGGGGCGTCAGAGGTGAAATTCTTGGATCGCCCCAA 62 Query 255 GACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTA 314 ||||||||||||||||||| ||| ||||||| |||||||||||||| |||||||||||| Sbjct 61 GACTAACTACTGCGAAAGCATTCGCCAAGGACGTTTTCATTAATCA-AGAACGAAAGTTA 3 Query 315 GG 316 || Sbjct 2 GG 1 Score = 210 bits (232), Expect = 4e-52 Identities = 197/243 (81%), Gaps = 16/243 (7%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAA 134 ||||||||| |||||||||||||||| |||| || ||||| |||||||||||| Sbjct 7238 TTACTTTGAGGAAATTAGAGTGTTCAAGGCAGTAGTT-----GAATATATTAGCATGGAA 7184 Query 135 TAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAAT 194 ||| |||| |||| | ||||||| |||||||||| || |||| ||||||||||| Sbjct 7183 TAACAGAAGAGGA--TACGGTTCT--TTTGTTGGTTC---GGGCCGC-GTAATGATTAAC 7132 Query 195 AGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAA 254 ||||| |||||||| ||||||||| ||||||| |||||||||||||| || Sbjct 7131 AGGGACGGTCGGGGGCGTCAGTATTGGGC-GTCAGAG-TGAAATTCTTGGATCGCCCCAA 7074 Query 255 GACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTA 314 ||||||||||||||||||| ||| ||||||| |||||||||||||| |||||||||||| Sbjct 7073 GACTAACTACTGCGAAAGCATTCGCCAAGGACGTTTTCATTAATCA-AGAACGAAAGTTA 7015 Query 315 GGG 317 ||| Sbjct 7014 GGG 7012 >seq3 Length=2260675 Score = 219 bits (242), Expect = 8e-55 Identities = 199/244 (82%), Gaps = 14/244 (6%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAA 134 ||||||||| ||| ||||||||||||| |||| || ||||| |||||||||||| Sbjct 1111 TTACTTTGAGAAA-TTAGAGTGTTCAAGGCAGTAGTT-----GAATATATTAGCATGGAA 1164 Query 135 TAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAAT 194 ||| |||| |||| | ||||||| |||||||||| || |||| ||||||||||| Sbjct 1165 TAACAGAAGAGGA--TACGGTTCT--TTTGTTGGTTCG--GGGCCGC-GTAATGATTAAC 1217 Query 195 AGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAA 254 ||||| |||||||| ||||||||| |||||||||||||||||||||| || Sbjct 1218 AGGGACGGTCGGGGGCGTCAGTATTGGGGCGTCAGAGGTGAAATTCTTGGATCGCCCCAA 1277 Query 255 GACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTA 314 ||||||||||||||||||| ||| ||||||| |||||||||||||| |||||||||||| Sbjct 1278 GACTAACTACTGCGAAAGCATTCGCCAAGGACGTTTTCATTAATCA-AGAACGAAAGTTA 1336 Query 315 GGGG 318 |||| Sbjct 1337 GGGG 1340 >seq1 Length=2891404 Score = 77.0 bits (84), Expect = 6e-12 Identities = 52/57 (91%), Gaps = 1/57 (2%) Strand=Plus/Minus Query 262 TACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 |||||||||||| ||| ||||||| |||||||||||||| |||||||||||||||| Sbjct 2891404 TACTGCGAAAGCATTCGCCAAGGACGTTTTCATTAATCA-AGAACGAAAGTTAGGGG 2891349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915199935936