Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20phaffii_20[genbank_20GCA_5F001708085.1_202016-08-12] 7 sequences; 9,397,609 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq7 197 6e-48 seq6 197 6e-48 seq3 197 6e-48 seq1 192 2e-46 seq4 176 2e-41 >seq7 Length=11027 Score = 197 bits (218), Expect = 6e-48 Identities = 127/138 (92%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 548 TGAGTAAG--AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTG 605 ||||| || |||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct 2849 TGAGTGAGCCAGCACCCCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCG 2790 Query 606 AAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAA 665 ||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||| | Sbjct 2789 AAGCCTGAGGAAACTCTGGTGGAGGCCCGCAGCGGTTCTGACGTGCAAATCGATCGTCGA 2730 Query 666 ATTTGGGTATAGGGGCGA 683 |||||||||||||||||| Sbjct 2729 ATTTGGGTATAGGGGCGA 2712 Score = 181 bits (200), Expect = 4e-43 Identities = 125/138 (91%), Gaps = 4/138 (3%) Strand=Plus/Minus Query 548 TGAGTAAG--AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTG 605 ||||| || |||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct 9865 TGAGTGAGCCAGCACCCCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCG 9806 Query 606 AAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAA 665 ||||| |||||||||||||| ||||| |||||| |||||| ||||||||||||||||| | Sbjct 9805 AAGCCTGAGGAAACTCTGGT-GAGGCCCGCAGC-GTTCTGACGTGCAAATCGATCGTCGA 9748 Query 666 ATTTGGGTATAGGGGCGA 683 |||||||||||||||||| Sbjct 9747 ATTTGGGTATAGGGGCGA 9730 Score = 158 bits (174), Expect = 5e-36 Identities = 134/163 (82%), Gaps = 3/163 (2%) Strand=Plus/Minus Query 36 CGAC-GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 |||| ||||||||||||||||||||||||||||||| || |||| | | || || | Sbjct 3131 CGACAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAA--GGTGGTAGGGTCCATCAAAGAC 3074 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||| || ||||||||||||| ||||||| |||||| ||||||||||||| |||| Sbjct 3073 TAAATATCAGCGAGAGACCGATAGCAAACAAGTACAGTGATGGAAAGATGAAAAGAACTT 3014 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197 || ||||||||| ||| || |||||||||| | ||||||| Sbjct 3013 TGAAAAGAGAGTGAAACAGTGCGTGAAATTGGGGGGAGGGAAG 2971 Score = 158 bits (174), Expect = 5e-36 Identities = 134/163 (82%), Gaps = 3/163 (2%) Strand=Plus/Minus Query 36 CGAC-GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 |||| ||||||||||||||||||||||||||||||| || |||| | | || || | Sbjct 10147 CGACAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAA--GGTGGTAGGGTCCATCAAAGAC 10090 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||| || ||||||||||||| ||||||| |||||| ||||||||||||| |||| Sbjct 10089 TAAATATCAGCGAGAGACCGATAGCAAACAAGTACAGTGATGGAAAGATGAAAAGAACTT 10030 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197 || ||||||||| ||| || |||||||||| | ||||||| Sbjct 10029 TGAAAAGAGAGTGAAACAGTGCGTGAAATTGGGGGGAGGGAAG 9987 >seq6 Length=11416 Score = 197 bits (218), Expect = 6e-48 Identities = 127/138 (92%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 548 TGAGTAAG--AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTG 605 ||||| || |||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct 5501 TGAGTGAGCCAGCACCCCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCG 5442 Query 606 AAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAA 665 ||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||| | Sbjct 5441 AAGCCTGAGGAAACTCTGGTGGAGGCCCGCAGCGGTTCTGACGTGCAAATCGATCGTCGA 5382 Query 666 ATTTGGGTATAGGGGCGA 683 |||||||||||||||||| Sbjct 5381 ATTTGGGTATAGGGGCGA 5364 Score = 141 bits (156), Expect = 4e-31 Identities = 124/151 (82%), Gaps = 5/151 (3%) Strand=Plus/Minus Query 36 CGAC-GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 |||| |||||||||||||||||||||||||| ||| || |||| | | || || | Sbjct 5780 CGACAGAGTCGAGTTGTTTGGGAATGCAGCT--AAA--GGTGGTAGGGTCCATCAAAGAC 5725 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||| || ||||||||||||| ||||||| |||||| ||||||||||||| |||| Sbjct 5724 TAAATATCAGCGAGAGACCGATAGCAAACAAGTACAGTGATGGAAAGATGAAAAGAACTT 5665 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTG 185 || ||||||||| ||| || |||||||||| Sbjct 5664 TGAAAAGAGAGTGAAACAGTGCGTGAAATTG 5634 >seq3 Length=2260675 Score = 197 bits (218), Expect = 6e-48 Identities = 127/138 (92%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 548 TGAGTAAG--AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTG 605 ||||| || |||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct 2871 TGAGTGAGCCAGCACCCCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCG 2930 Query 606 AAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAA 665 ||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||| | Sbjct 2931 AAGCCTGAGGAAACTCTGGTGGAGGCCCGCAGCGGTTCTGACGTGCAAATCGATCGTCGA 2990 Query 666 ATTTGGGTATAGGGGCGA 683 |||||||||||||||||| Sbjct 2991 ATTTGGGTATAGGGGCGA 3008 Score = 154 bits (170), Expect = 6e-35 Identities = 126/151 (83%), Gaps = 3/151 (2%) Strand=Plus/Plus Query 36 CGAC-GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 |||| ||||||||||||||||||||||||||||||| || |||| | | || || | Sbjct 2588 CGACAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAA--GGTGGTAGGGTCCATCAAAGAC 2645 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||| || ||||||||||||| ||||||| |||||| ||||||||||||| |||| Sbjct 2646 TAAATATCAGCGAGAGACCGATAGCAAACAAGTACAGTGATGGAAAGATGAAAAGAACTT 2705 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTG 185 || ||||||||| ||| || |||||||||| Sbjct 2706 TGAAAAGAGAGTGAAACAGTGCGTGAAATTG 2736 >seq1 Length=2891404 Score = 192 bits (212), Expect = 2e-46 Identities = 124/135 (92%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 548 TGAGTAAG--AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTG 605 ||||| || |||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct 2889813 TGAGTGAGCCAGCACCCCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCG 2889754 Query 606 AAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAA 665 ||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||| | Sbjct 2889753 AAGCCTGAGGAAACTCTGGTGGAGGCCCGCAGCGGTTCTGACGTGCAAATCGATCGTCGA 2889694 Query 666 ATTTGGGTATAGGGG 680 ||||||||||||||| Sbjct 2889693 ATTTGGGTATAGGGG 2889679 Score = 158 bits (174), Expect = 5e-36 Identities = 134/163 (82%), Gaps = 3/163 (2%) Strand=Plus/Minus Query 36 CGAC-GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 |||| ||||||||||||||||||||||||||||||| || |||| | | || || | Sbjct 2890097 CGACAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAA--GGTGGTAGGGTCCATCAAAGAC 2890040 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||| || ||||||||||||| ||||||| |||||| ||||||||||||| |||| Sbjct 2890039 TAAATATCAGCGAGAGACCGATAGCAAACAAGTACAGTGATGGAAAGATGAAAAGAACTT 2889980 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197 || ||||||||| ||| || |||||||||| | ||||||| Sbjct 2889979 TGAAAAGAGAGTGAAACAGTGCGTGAAATTGGGGGGAGGGAAG 2889937 >seq4 Length=1814878 Score = 176 bits (194), Expect = 2e-41 Identities = 122/135 (90%), Gaps = 4/135 (3%) Strand=Plus/Plus Query 548 TGAGTAAG--AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTG 605 ||||| || |||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct 564 TGAGTGAGCCAGCACCCCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCG 623 Query 606 AAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGT-CA 664 ||||| |||||||||||||||||||| |||||| |||||| |||||||||||||||| | Sbjct 624 AAGCCTGAGGAAACTCTGGTGGAGGCCCGCAGC-GTTCTGACGTGCAAATCGATCGTCCG 682 Query 665 AATTTGGGTATAGGG 679 ||||||||||||||| Sbjct 683 AATTTGGGTATAGGG 697 Score = 158 bits (174), Expect = 5e-36 Identities = 134/163 (82%), Gaps = 3/163 (2%) Strand=Plus/Plus Query 36 CGAC-GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 |||| ||||||||||||||||||||||||||||||| || |||| | | || || | Sbjct 283 CGACAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAA--GGTGGTAGGGTCCATCAAAGAC 340 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||| || ||||||||||||| ||||||| |||||| ||||||||||||| |||| Sbjct 341 TAAATATCAGCGAGAGACCGATAGCAAACAAGTACAGTGATGGAAAGATGAAAAGAACTT 400 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197 || ||||||||| ||| || |||||||||| | ||||||| Sbjct 401 TGAAAAGAGAGTGAAACAGTGCGTGAAATTGGGGGGAGGGAAG 443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999849850