Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20phaffii_20[genbank_20GCA_5F001708085.1_202016-08-12]
7 sequences; 9,397,609 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq7 253 3e-65
seq1 253 3e-65
seq3 246 5e-63
seq6 232 1e-58
>seq7
Length=11027
Score = 253 bits (280), Expect = 3e-65
Identities = 214/257 (83%), Gaps = 7/257 (3%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 3891 ACTCGCTGCCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 3950
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||| ||||| ||||| | |||| | |||| ||||||||| | ||
Sbjct 3951 CCTGTTATTGCCTCG--CTTCCGCTGGCTTGC-GCCAGTTGTCCTTCTAAGAAG--ATCC 4005
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
||| | || | | ||| ||| || ||||||||||||||||||| ||||||
Sbjct 4006 CCCAGCAATGCCAGGTAAC-CTAGTTAAAAGCC-AAGGTCTCGTTCGTTATCGCAATTAA 4063
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 4064 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAA 4123
Query 242 AGAGCTATCAATCTGTC 258
|| ||| ||| |||||
Sbjct 4124 AGTGCTCTCATCCTGTC 4140
Score = 136 bits (150), Expect = 6e-30
Identities = 100/114 (88%), Gaps = 3/114 (3%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 10910 ACTCGCTGCCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 10969
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115
|||||||||||||| ||||| ||||| | |||| | |||| |||||||||
Sbjct 10970 CCTGTTATTGCCTC--GCTTCCGCTGGCTTG-CGCCAGTTGTCCTTCTAAGAAG 11020
>seq1
Length=2891404
Score = 253 bits (280), Expect = 3e-65
Identities = 214/257 (83%), Gaps = 7/257 (3%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2890864 ACTCGCTGCCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 2890923
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||| ||||| ||||| | |||| | |||| ||||||||| | ||
Sbjct 2890924 CCTGTTATTGCCTCG--CTTCCGCTGGCTTGC-GCCAGTTGTCCTTCTAAGAAG--ATCC 2890978
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
||| | || | | ||| ||| || ||||||||||||||||||| ||||||
Sbjct 2890979 CCCAGCAATGCCAGGTAAC-CTAGTTAAAAGCC-AAGGTCTCGTTCGTTATCGCAATTAA 2891036
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 2891037 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAA 2891096
Query 242 AGAGCTATCAATCTGTC 258
|| ||| ||| |||||
Sbjct 2891097 AGTGCTCTCATCCTGTC 2891113
>seq3
Length=2260675
Score = 246 bits (272), Expect = 5e-63
Identities = 213/257 (83%), Gaps = 8/257 (3%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || ||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct 1824 ACTCGCTGCCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGG-CATCACAGA 1766
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||| ||||| ||||| | |||| | |||| ||||||||| | ||
Sbjct 1765 CCTGTTATTGCCTCG--CTTCCGCTGGCTTGC-GCCAGTTGTCCTTCTAAGAAG--ATCC 1711
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
||| | || | | ||| ||| || ||||||||||||||||||| ||||||
Sbjct 1710 CCCAGCAATGCCAGGTAAC-CTAGTTAAAAGCC-AAGGTCTCGTTCGTTATCGCAATTAA 1653
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 1652 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAA 1593
Query 242 AGAGCTATCAATCTGTC 258
|| ||| ||| |||||
Sbjct 1592 AGTGCTCTCATCCTGTC 1576
>seq6
Length=11416
Score = 232 bits (256), Expect = 1e-58
Identities = 210/257 (82%), Gaps = 12/257 (5%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || |||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 6535 ACTCGCTGCCTCCGTCAGTGTAGCGCGCG--CGGCCCAGAACGTCTAAGGGCATCACAGA 6592
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||| ||||| ||||| | |||| | |||| ||||||||| | ||
Sbjct 6593 CCTGTTATTGCCTCG--CTTCCGCTGGCTTGC-GCCAGTTGTCCTTCTAAGAAG--ATCC 6647
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
||| | || | | ||| ||| | | ||||||||||||||||||| ||||||
Sbjct 6648 CCCAGCAATGCCAGGTAAC-CTAGTTA--AAGCCAAGGTCTCGTTCGTTATCGCAATTAA 6704
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
|||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||
Sbjct 6705 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCAC--CCACCCACAAAATCAAGAA 6762
Query 242 AGAGCTATCAATCTGTC 258
|| ||| ||| |||||
Sbjct 6763 AGTGCTCTCATCCTGTC 6779
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796799945967
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |