Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20phaffii_20[genbank_20GCA_5F001708085.1_202016-08-12] 7 sequences; 9,397,609 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq7 91.5 9e-17 seq6 91.5 9e-17 seq3 91.5 9e-17 seq1 91.5 9e-17 >seq7 Length=11027 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 ||| |||| |||||||| ||||| || ||||||||| ||||||||||| |||||||||| Sbjct 3711 TCCCAAAGC-CTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 3767 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| || ||| |||| Sbjct 3768 GGCAGGGACGTAAT-CAGCGCGAGCT 3792 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 10736 CTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 10793 Query 109 TAATACAACGCAAGCT 124 |||| || ||| |||| Sbjct 10794 TAAT-CAGCGCGAGCT 10808 >seq6 Length=11416 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 ||| |||| |||||||| ||||| || ||||||||| ||||||||||| |||||||||| Sbjct 6353 TCCCAAAGC-CTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 6409 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| || ||| |||| Sbjct 6410 GGCAGGGACGTAAT-CAGCGCGAGCT 6434 >seq3 Length=2260675 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 ||| |||| |||||||| ||||| || ||||||||| ||||||||||| |||||||||| Sbjct 2007 TCCCAAAGC-CTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 1951 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| || ||| |||| Sbjct 1950 GGCAGGGACGTAAT-CAGCGCGAGCT 1926 >seq1 Length=2891404 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 ||| |||| |||||||| ||||| || ||||||||| ||||||||||| |||||||||| Sbjct 2890681 TCCCAAAGC-CTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 2890737 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| || ||| |||| Sbjct 2890738 GGCAGGGACGTAAT-CAGCGCGAGCT 2890762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300799980260