Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20phaffii_20[genbank_20GCA_5F001708085.1_202016-08-12] 7 sequences; 9,397,609 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq7 116 4e-24 seq6 116 4e-24 seq3 113 5e-23 >seq7 Length=11027 Score = 116 bits (128), Expect = 4e-24 Identities = 132/173 (76%), Gaps = 13/173 (8%) Strand=Plus/Minus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCATGGAA 73 ||||||||| ||||||||| |||||| |||| || ||||| |||| ||||||| Sbjct 4606 TTACTTTGAGGAAATTAGAGTGTTCAAGGCAGTAGTT-----GAATATATTAGCATGGAA 4552 Query 74 TAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAA 133 ||| |||| |||| | ||||||| ||||| |||| || |||| |||||||| || Sbjct 4551 TAACAGAAGAGGA--TACGGTTCT--TTTGTTGGTTCG--GGGCCGC--GTAATGATTAA 4500 Query 134 TACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 | ||| |||||||| ||||||||| |||| ||||||||||||||||| Sbjct 4499 CAGGGACGGTCGGGGGCGTCAGTATTGGGGCGTCAGAGGTGAAATTCTTGGAT 4447 >seq6 Length=11416 Score = 116 bits (128), Expect = 4e-24 Identities = 132/173 (76%), Gaps = 13/173 (8%) Strand=Plus/Minus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCATGGAA 73 ||||||||| ||||||||| |||||| |||| || ||||| |||| ||||||| Sbjct 229 TTACTTTGAGGAAATTAGAGTGTTCAAGGCAGTAGTT-----GAATATATTAGCATGGAA 175 Query 74 TAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAA 133 ||| |||| |||| | ||||||| ||||| |||| || |||| |||||||| || Sbjct 174 TAACAGAAGAGGA--TACGGTTCT--TTTGTTGGTTCG--GGGCCGC--GTAATGATTAA 123 Query 134 TACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 | ||| |||||||| ||||||||| |||| ||||||||||||||||| Sbjct 122 CAGGGACGGTCGGGGGCGTCAGTATTGGGGCGTCAGAGGTGAAATTCTTGGAT 70 Score = 105 bits (116), Expect = 7e-21 Identities = 131/173 (76%), Gaps = 16/173 (9%) Strand=Plus/Minus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCATGGAA 73 ||||||||| ||||||||| |||||| |||| || ||||| |||| ||||||| Sbjct 7238 TTACTTTGAGGAAATTAGAGTGTTCAAGGCAGTAGTT-----GAATATATTAGCATGGAA 7184 Query 74 TAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAA 133 ||| |||| |||| | ||||||| ||||| |||| || |||| |||||||| || Sbjct 7183 TAACAGAAGAGGA--TACGGTTCT--TTTGTTGGTTC---GGGCCGC--GTAATGATTAA 7133 Query 134 TACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 | ||| |||||||| ||||||||| |||| || |||||||||||||| Sbjct 7132 CAGGGACGGTCGGGGGCGTCAGTATTGGGC-GTCAGAG-TGAAATTCTTGGAT 7082 >seq3 Length=2260675 Score = 113 bits (124), Expect = 5e-23 Identities = 132/173 (76%), Gaps = 14/173 (8%) Strand=Plus/Plus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCATGGAA 73 ||||||||| ||| |||||| |||||| |||| || ||||| |||| ||||||| Sbjct 1111 TTACTTTGAGAAA-TTAGAGTGTTCAAGGCAGTAGTT-----GAATATATTAGCATGGAA 1164 Query 74 TAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAA 133 ||| |||| |||| | ||||||| ||||| |||| || |||| |||||||| || Sbjct 1165 TAACAGAAGAGGA--TACGGTTCT--TTTGTTGGTTCG--GGGCCGC--GTAATGATTAA 1216 Query 134 TACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 | ||| |||||||| ||||||||| |||| ||||||||||||||||| Sbjct 1217 CAGGGACGGTCGGGGGCGTCAGTATTGGGGCGTCAGAGGTGAAATTCTTGGAT 1269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511999965280