Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20phaffii_20[genbank_20GCA_5F001708085.1_202016-08-12]
7 sequences; 9,397,609 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq7 250 5e-64
seq1 250 5e-64
seq3 242 7e-62
seq6 235 1e-59
>seq7
Length=11027
Score = 250 bits (276), Expect = 5e-64
Identities = 211/257 (82%), Gaps = 13/257 (5%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131
||||||||| |||| | ||| |||||| ||||| |||||||||||||||||||||
Sbjct 11020 CTTCTTAGAAGGACAACTGGCGCAAGCCAGCGGAAGC--GAGGCAATAACAGGTCTGTGA 10963
Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191
|||||||||| ||||||||||||||||||||||||||||| ||| || ||||| |
Sbjct 10962 TGCCCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGGCAGCGAGT------C 10909
Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251
|||| | | | | | ||| |||| ||| |||| |||||||||||||||| || ||||
Sbjct 10908 CTTGCCAGAGATGGCCGGGGAATC---TTAGACTCCGTCGTGCTGGGGATAGCGCTTTGC 10852
Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311
|| || |||||||||||||| ||||||||||||| ||||||||| |||| ||||||
Sbjct 10851 AA--GAGGCGCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGCTGATTA 10794
Query 312 CGTCCCTGCCCTTTGTA 328
|||||||||||||||||
Sbjct 10793 CGTCCCTGCCCTTTGTA 10777
Score = 244 bits (270), Expect = 2e-62
Identities = 211/257 (82%), Gaps = 16/257 (6%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131
||||||||| |||| | ||| |||||| ||||| |||||||||||||||||||||
Sbjct 4001 CTTCTTAGAAGGACAACTGGCGCAAGCCAGCGGAAGC--GAGGCAATAACAGGTCTGTGA 3944
Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191
|||||||||| ||||||||||||||||||||||||||||| ||| || ||||| |
Sbjct 3943 TGCCCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGGCAGCGAGT------C 3890
Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251
||| ||| || | ||| |||| ||| |||| |||||||||||||||| || ||||
Sbjct 3889 CTT-GCCAGA--GATGGGGGAATC---TTAGACTCCGTCGTGCTGGGGATAGCGCTTTGC 3836
Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311
|| || |||||||||||||| ||||||||||||| ||||||||| |||| ||||||
Sbjct 3835 AA--GAGGCGCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGCTGATTA 3778
Query 312 CGTCCCTGCCCTTTGTA 328
|||||||||||||||||
Sbjct 3777 CGTCCCTGCCCTTTGTA 3761
>seq1
Length=2891404
Score = 250 bits (276), Expect = 5e-64
Identities = 211/257 (82%), Gaps = 13/257 (5%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131
||||||||| |||| | ||| |||||| ||||| |||||||||||||||||||||
Sbjct 2890974 CTTCTTAGAAGGACAACTGGCGCAAGCCAGCGGAAGC--GAGGCAATAACAGGTCTGTGA 2890917
Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191
|||||||||| ||||||||||||||||||||||||||||| ||| || ||||| |
Sbjct 2890916 TGCCCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGGCAGCGAGT------C 2890863
Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251
|||| | | | | | ||| |||| ||| |||| |||||||||||||||| || ||||
Sbjct 2890862 CTTGCCAGAGATGGCCGGGGAATC---TTAGACTCCGTCGTGCTGGGGATAGCGCTTTGC 2890806
Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311
|| || |||||||||||||| ||||||||||||| ||||||||| |||| ||||||
Sbjct 2890805 AA--GAGGCGCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGCTGATTA 2890748
Query 312 CGTCCCTGCCCTTTGTA 328
|||||||||||||||||
Sbjct 2890747 CGTCCCTGCCCTTTGTA 2890731
>seq3
Length=2260675
Score = 242 bits (268), Expect = 7e-62
Identities = 210/257 (82%), Gaps = 14/257 (5%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131
||||||||| |||| | ||| |||||| ||||| |||||||||||||||||||||
Sbjct 1715 CTTCTTAGAAGGACAACTGGCGCAAGCCAGCGGAAGC--GAGGCAATAACAGGTCTGTGA 1772
Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191
|||| ||||| ||||||||||||||||||||||||||||| ||| || ||||| |
Sbjct 1773 TGCC-TTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGGCAGCGAGT------C 1825
Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251
|||| | | | | | ||| |||||| | |||| |||||||||||||||| || ||||
Sbjct 1826 CTTGCCAGAGATGGCCGGGGAATCTT---AGACTCCGTCGTGCTGGGGATAGCGCTTTGC 1882
Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311
|| || |||||||||||||| ||||||||||||| ||||||||| |||| ||||||
Sbjct 1883 AAGAG--GCGCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGCTGATTA 1940
Query 312 CGTCCCTGCCCTTTGTA 328
|||||||||||||||||
Sbjct 1941 CGTCCCTGCCCTTTGTA 1957
>seq6
Length=11416
Score = 235 bits (260), Expect = 1e-59
Identities = 209/257 (81%), Gaps = 16/257 (6%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131
||||||||| |||| | ||| |||||| ||||| |||||||||||||||||||||
Sbjct 6643 CTTCTTAGAAGGACAACTGGCGCAAGCCAGCGGAAGC--GAGGCAATAACAGGTCTGTGA 6586
Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191
|||||||||| |||||||||||| ||||||||||||||| ||| || ||||| |
Sbjct 6585 TGCCCTTAGACGTTCTGGGCCGC--GCGCGCTACACTGACGGAGGCAGCGAGT------C 6534
Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251
|||| | | | | | ||| |||||| | |||| |||||||||||||||| || ||||
Sbjct 6533 CTTGCCAGAGATGGCCGGG-AATCTT---AGACTCCGTCGTGCTGGGGATAGCGCTTTGC 6478
Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311
|| || |||||||||||||| ||||||||||||| ||||||||| |||| ||||||
Sbjct 6477 AAGAG--GCGCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGCTGATTA 6420
Query 312 CGTCCCTGCCCTTTGTA 328
|||||||||||||||||
Sbjct 6419 CGTCCCTGCCCTTTGTA 6403
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947199933696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |