Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20phaffii_20[genbank_20GCA_5F001708085.1_202016-08-12] 7 sequences; 9,397,609 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq7 250 5e-64 seq1 250 5e-64 seq3 242 7e-62 seq6 235 1e-59 >seq7 Length=11027 Score = 250 bits (276), Expect = 5e-64 Identities = 211/257 (82%), Gaps = 13/257 (5%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 ||||||||| |||| | ||| |||||| ||||| ||||||||||||||||||||| Sbjct 11020 CTTCTTAGAAGGACAACTGGCGCAAGCCAGCGGAAGC--GAGGCAATAACAGGTCTGTGA 10963 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 |||||||||| ||||||||||||||||||||||||||||| ||| || ||||| | Sbjct 10962 TGCCCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGGCAGCGAGT------C 10909 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 |||| | | | | | ||| |||| ||| |||| |||||||||||||||| || |||| Sbjct 10908 CTTGCCAGAGATGGCCGGGGAATC---TTAGACTCCGTCGTGCTGGGGATAGCGCTTTGC 10852 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 || || |||||||||||||| ||||||||||||| ||||||||| |||| |||||| Sbjct 10851 AA--GAGGCGCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGCTGATTA 10794 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||||||||||| Sbjct 10793 CGTCCCTGCCCTTTGTA 10777 Score = 244 bits (270), Expect = 2e-62 Identities = 211/257 (82%), Gaps = 16/257 (6%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 ||||||||| |||| | ||| |||||| ||||| ||||||||||||||||||||| Sbjct 4001 CTTCTTAGAAGGACAACTGGCGCAAGCCAGCGGAAGC--GAGGCAATAACAGGTCTGTGA 3944 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 |||||||||| ||||||||||||||||||||||||||||| ||| || ||||| | Sbjct 3943 TGCCCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGGCAGCGAGT------C 3890 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 ||| ||| || | ||| |||| ||| |||| |||||||||||||||| || |||| Sbjct 3889 CTT-GCCAGA--GATGGGGGAATC---TTAGACTCCGTCGTGCTGGGGATAGCGCTTTGC 3836 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 || || |||||||||||||| ||||||||||||| ||||||||| |||| |||||| Sbjct 3835 AA--GAGGCGCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGCTGATTA 3778 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||||||||||| Sbjct 3777 CGTCCCTGCCCTTTGTA 3761 >seq1 Length=2891404 Score = 250 bits (276), Expect = 5e-64 Identities = 211/257 (82%), Gaps = 13/257 (5%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 ||||||||| |||| | ||| |||||| ||||| ||||||||||||||||||||| Sbjct 2890974 CTTCTTAGAAGGACAACTGGCGCAAGCCAGCGGAAGC--GAGGCAATAACAGGTCTGTGA 2890917 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 |||||||||| ||||||||||||||||||||||||||||| ||| || ||||| | Sbjct 2890916 TGCCCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGGCAGCGAGT------C 2890863 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 |||| | | | | | ||| |||| ||| |||| |||||||||||||||| || |||| Sbjct 2890862 CTTGCCAGAGATGGCCGGGGAATC---TTAGACTCCGTCGTGCTGGGGATAGCGCTTTGC 2890806 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 || || |||||||||||||| ||||||||||||| ||||||||| |||| |||||| Sbjct 2890805 AA--GAGGCGCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGCTGATTA 2890748 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||||||||||| Sbjct 2890747 CGTCCCTGCCCTTTGTA 2890731 >seq3 Length=2260675 Score = 242 bits (268), Expect = 7e-62 Identities = 210/257 (82%), Gaps = 14/257 (5%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 ||||||||| |||| | ||| |||||| ||||| ||||||||||||||||||||| Sbjct 1715 CTTCTTAGAAGGACAACTGGCGCAAGCCAGCGGAAGC--GAGGCAATAACAGGTCTGTGA 1772 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 |||| ||||| ||||||||||||||||||||||||||||| ||| || ||||| | Sbjct 1773 TGCC-TTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGGCAGCGAGT------C 1825 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 |||| | | | | | ||| |||||| | |||| |||||||||||||||| || |||| Sbjct 1826 CTTGCCAGAGATGGCCGGGGAATCTT---AGACTCCGTCGTGCTGGGGATAGCGCTTTGC 1882 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 || || |||||||||||||| ||||||||||||| ||||||||| |||| |||||| Sbjct 1883 AAGAG--GCGCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGCTGATTA 1940 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||||||||||| Sbjct 1941 CGTCCCTGCCCTTTGTA 1957 >seq6 Length=11416 Score = 235 bits (260), Expect = 1e-59 Identities = 209/257 (81%), Gaps = 16/257 (6%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 ||||||||| |||| | ||| |||||| ||||| ||||||||||||||||||||| Sbjct 6643 CTTCTTAGAAGGACAACTGGCGCAAGCCAGCGGAAGC--GAGGCAATAACAGGTCTGTGA 6586 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 |||||||||| |||||||||||| ||||||||||||||| ||| || ||||| | Sbjct 6585 TGCCCTTAGACGTTCTGGGCCGC--GCGCGCTACACTGACGGAGGCAGCGAGT------C 6534 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 |||| | | | | | ||| |||||| | |||| |||||||||||||||| || |||| Sbjct 6533 CTTGCCAGAGATGGCCGGG-AATCTT---AGACTCCGTCGTGCTGGGGATAGCGCTTTGC 6478 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 || || |||||||||||||| ||||||||||||| ||||||||| |||| |||||| Sbjct 6477 AAGAG--GCGCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGCTGATTA 6420 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||||||||||| Sbjct 6419 CGTCCCTGCCCTTTGTA 6403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947199933696