Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20phaffii_20[genbank_20GCA_5F001708085.1_202016-08-12] 7 sequences; 9,397,609 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq7 87.8 3e-15 seq6 87.8 3e-15 seq4 87.8 3e-15 seq3 87.8 3e-15 seq2 87.8 3e-15 seq1 87.8 3e-15 >seq7 Length=11027 Score = 87.8 bits (96), Expect = 3e-15 Identities = 90/113 (80%), Gaps = 5/113 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | ||| || | |||||||||| ||||| ||||| | |||| Sbjct 873 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 817 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 || ||| ||||| || | ||| ||||||||||||||||||||||||||| Sbjct 816 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 766 Score = 87.8 bits (96), Expect = 3e-15 Identities = 90/113 (80%), Gaps = 5/113 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | ||| || | |||||||||| ||||| ||||| | |||| Sbjct 7898 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 7842 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 || ||| ||||| || | ||| ||||||||||||||||||||||||||| Sbjct 7841 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 7791 >seq6 Length=11416 Score = 87.8 bits (96), Expect = 3e-15 Identities = 90/113 (80%), Gaps = 5/113 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | ||| || | |||||||||| ||||| ||||| | |||| Sbjct 3524 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 3468 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 || ||| ||||| || | ||| ||||||||||||||||||||||||||| Sbjct 3467 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 3417 Score = 87.8 bits (96), Expect = 3e-15 Identities = 90/113 (80%), Gaps = 5/113 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | ||| || | |||||||||| ||||| ||||| | |||| Sbjct 10492 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 10436 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 || ||| ||||| || | ||| ||||||||||||||||||||||||||| Sbjct 10435 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 10385 >seq4 Length=1814878 Score = 87.8 bits (96), Expect = 3e-15 Identities = 90/113 (80%), Gaps = 5/113 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | ||| || | |||||||||| ||||| ||||| | |||| Sbjct 2548 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 2604 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 || ||| ||||| || | ||| ||||||||||||||||||||||||||| Sbjct 2605 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 2655 >seq3 Length=2260675 Score = 87.8 bits (96), Expect = 3e-15 Identities = 90/113 (80%), Gaps = 5/113 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | ||| || | |||||||||| ||||| ||||| | |||| Sbjct 4852 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 4908 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 || ||| ||||| || | ||| ||||||||||||||||||||||||||| Sbjct 4909 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 4959 >seq2 Length=2396783 Score = 87.8 bits (96), Expect = 3e-15 Identities = 90/113 (80%), Gaps = 5/113 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | ||| || | |||||||||| ||||| ||||| | |||| Sbjct 917 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 973 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 || ||| ||||| || | ||| ||||||||||||||||||||||||||| Sbjct 974 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 1024 >seq1 Length=2891404 Score = 87.8 bits (96), Expect = 3e-15 Identities = 90/113 (80%), Gaps = 5/113 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | ||| || | |||||||||| ||||| ||||| | |||| Sbjct 2887830 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 2887774 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 || ||| ||||| || | ||| ||||||||||||||||||||||||||| Sbjct 2887773 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 2887723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199944448