Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20phaffii_20[genbank_20GCA_5F001708085.1_202016-08-12]
7 sequences; 9,397,609 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq7 87.8 3e-15
seq6 87.8 3e-15
seq4 87.8 3e-15
seq3 87.8 3e-15
seq2 87.8 3e-15
seq1 87.8 3e-15
>seq7
Length=11027
Score = 87.8 bits (96), Expect = 3e-15
Identities = 90/113 (80%), Gaps = 5/113 (4%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || | |||||||||| ||||| ||||| | ||||
Sbjct 873 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 817
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
|| ||| ||||| || | ||| |||||||||||||||||||||||||||
Sbjct 816 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 766
Score = 87.8 bits (96), Expect = 3e-15
Identities = 90/113 (80%), Gaps = 5/113 (4%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || | |||||||||| ||||| ||||| | ||||
Sbjct 7898 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 7842
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
|| ||| ||||| || | ||| |||||||||||||||||||||||||||
Sbjct 7841 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 7791
>seq6
Length=11416
Score = 87.8 bits (96), Expect = 3e-15
Identities = 90/113 (80%), Gaps = 5/113 (4%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || | |||||||||| ||||| ||||| | ||||
Sbjct 3524 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 3468
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
|| ||| ||||| || | ||| |||||||||||||||||||||||||||
Sbjct 3467 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 3417
Score = 87.8 bits (96), Expect = 3e-15
Identities = 90/113 (80%), Gaps = 5/113 (4%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || | |||||||||| ||||| ||||| | ||||
Sbjct 10492 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 10436
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
|| ||| ||||| || | ||| |||||||||||||||||||||||||||
Sbjct 10435 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 10385
>seq4
Length=1814878
Score = 87.8 bits (96), Expect = 3e-15
Identities = 90/113 (80%), Gaps = 5/113 (4%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || | |||||||||| ||||| ||||| | ||||
Sbjct 2548 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 2604
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
|| ||| ||||| || | ||| |||||||||||||||||||||||||||
Sbjct 2605 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 2655
>seq3
Length=2260675
Score = 87.8 bits (96), Expect = 3e-15
Identities = 90/113 (80%), Gaps = 5/113 (4%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || | |||||||||| ||||| ||||| | ||||
Sbjct 4852 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 4908
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
|| ||| ||||| || | ||| |||||||||||||||||||||||||||
Sbjct 4909 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 4959
>seq2
Length=2396783
Score = 87.8 bits (96), Expect = 3e-15
Identities = 90/113 (80%), Gaps = 5/113 (4%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || | |||||||||| ||||| ||||| | ||||
Sbjct 917 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 973
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
|| ||| ||||| || | ||| |||||||||||||||||||||||||||
Sbjct 974 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 1024
>seq1
Length=2891404
Score = 87.8 bits (96), Expect = 3e-15
Identities = 90/113 (80%), Gaps = 5/113 (4%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || | |||||||||| ||||| ||||| | ||||
Sbjct 2887830 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 2887774
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
|| ||| ||||| || | ||| |||||||||||||||||||||||||||
Sbjct 2887773 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 2887723
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819199944448
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |