Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20phaffii_20[genbank_20GCA_5F001708085.1_202016-08-12] 7 sequences; 9,397,609 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq3 574 1e-161 seq6 571 2e-160 seq7 567 2e-159 >seq3 Length=2260675 Score = 574 bits (636), Expect = 1e-161 Identities = 432/504 (86%), Gaps = 48/504 (10%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||| Sbjct 987 GTACTCATTCCAATTACAAGACC--AAAG-GCCCTGTATCGTTATTTATTGTCACTACCT 931 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 930 CCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTC 871 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||| Sbjct 870 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTAGAAACCATGGTA 811 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| |||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 810 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATC-----CT 756 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 | |||||| |||||||||||||||||||| |||||| Sbjct 755 AA---------GATTCGAAAAGTTATTATGAATCACCAA-----AACGAAGG-------- 718 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 ||||||||||||||||| | |||| ||| | | || ||||||||||||| Sbjct 717 -TTTTATCTAATAAATACGC-----CCGA----GGG---CTGATCAAGTATTAGCTCTAG 671 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 ||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||| Sbjct 670 AATTACCACGGTTATCCTTGTAGCAA--CACTATCAAATAAACGATAACTGATTTAATGA 613 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||||| |||| | ||| |||||||||||||||||||||||||||||| Sbjct 612 GCCATTCGCAGTTTCACCGTAT--AATGC-TATACTTAGACATGCATGGCTTAATCTTTG 556 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 555 AGACAAGCATATGACTACTGGCAG 532 >seq6 Length=11416 Score = 571 bits (632), Expect = 2e-160 Identities = 433/505 (86%), Gaps = 48/505 (10%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||| Sbjct 354 GTACTCATTCCAATTACAAGACC--AAAG-GCCCTGTATCGTTATTTATTGTCACTACCT 410 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTT-GGATGTGGTAGCCGT 119 ||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 411 CCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTTGGATGTGGTAGCCGT 470 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||||||||||||||||||||||||||||| |||||||||||||||| || |||||||| Sbjct 471 CTCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTAGAAACCATGGT 530 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 ||||| |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 531 AGGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATC-----C 585 Query 240 TCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGG 299 | | |||||| |||||||||||||||||||| | |||||| Sbjct 586 TAA---------GATTCGAAAAGTTATTATGAATCACCAAAAA----CGAAGG------- 625 Query 300 TTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTA 359 ||||||||||||||||| | |||| ||| | | || |||||||||||| Sbjct 626 --TTTTATCTAATAAATACGC-----CCGA----GGG---CTGATCAAGTATTAGCTCTA 671 Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419 |||||||||||||||||| ||||| || |||||||||||||||||||||||||||||| Sbjct 672 GAATTACCACGGTTATCCTTGTAGCAA--CACTATCAAATAAACGATAACTGATTTAATG 729 Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479 |||||||||||||||||| |||| | ||| ||||||||||||||||||||||||||||| Sbjct 730 AGCCATTCGCAGTTTCACCGTAT--AATGC-TATACTTAGACATGCATGGCTTAATCTTT 786 Query 480 GAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| Sbjct 787 GAGACAAGCATATGACTACTGGCAG 811 Score = 565 bits (626), Expect = 7e-159 Identities = 431/504 (86%), Gaps = 49/504 (10%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||| Sbjct 7362 GTACTCATTCCAATTACAAGACC--AAAG-GCCCTGTATCGTTATTTATTGTCACTACCT 7418 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 7419 CCCTGTGTCAGGATTGG-TAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTC 7477 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||| Sbjct 7478 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTAGAAACCATGGTA 7537 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| |||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 7538 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATC-----CT 7592 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 | |||||| |||||||||||||||||||| |||||| Sbjct 7593 AA---------GATTCGAAAAGTTATTATGAATCACCAA-----AACGAAGG-------- 7630 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 ||||||||||||||||| | |||| ||| | | || ||||||||||||| Sbjct 7631 -TTTTATCTAATAAATACGC-----CCGA----GGG---CTGATCAAGTATTAGCTCTAG 7677 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 ||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||| Sbjct 7678 AATTACCACGGTTATCCTTGTAGCAA--CACTATCAAATAAACGATAACTGATTTAATGA 7735 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||||| |||| | ||| |||||||||||||||||||||||||||||| Sbjct 7736 GCCATTCGCAGTTTCACCGTAT--AATGC-TATACTTAGACATGCATGGCTTAATCTTTG 7792 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 7793 AGACAAGCATATGACTACTGGCAG 7816 >seq7 Length=11027 Score = 567 bits (628), Expect = 2e-159 Identities = 432/505 (86%), Gaps = 49/505 (10%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||| Sbjct 4730 GTACTCATTCCAATTACAAGACC--AAAG-GCCCTGTATCGTTATTTATTGTCACTACCT 4786 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCC-TGCTGCCTTCCTTGGATGTGGTAGCCGT 119 ||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 4787 CCCTGTGTCAGGATTGGGTAATTTGCGCGCCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 4846 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||||||||||||||||||||||||||||| |||||||||||||||| || |||||||| Sbjct 4847 CTCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTAGAAACCATGGT 4906 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 ||||| |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 4907 AGGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATC-----C 4961 Query 240 TCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGG 299 | | |||||| |||||||||||||||||||| |||||| Sbjct 4962 TAA---------GATTCGAAAAGTTATTATGAATCACCAA-----AACGAAGG------- 5000 Query 300 TTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTA 359 ||||||||||||||||| | |||| ||| | | || |||||||||||| Sbjct 5001 --TTTTATCTAATAAATACGC-----CCGA----GGG---CTGATCAAGTATTAGCTCTA 5046 Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419 |||||||||||||||||| ||||| || |||||||||||||||||||||||||||||| Sbjct 5047 GAATTACCACGGTTATCCTTGTAGCAA--CACTATCAAATAAACGATAACTGATTTAATG 5104 Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479 |||||||||||||||||| |||| | ||| ||||||||||||||||||||||||||||| Sbjct 5105 AGCCATTCGCAGTTTCACCGTAT--AATGC-TATACTTAGACATGCATGGCTTAATCTTT 5161 Query 480 GAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| Sbjct 5162 GAGACAAGCATATGACTACTGGCAG 5186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510399894272