Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq1 190 2e-43
seq2 116 3e-21
seq7 98.7 8e-16
>seq1
Length=762788
Score = 190 bits (210), Expect = 2e-43
Identities = 579/875 (66%), Gaps = 36/875 (4%)
Strand=Plus/Minus
Query 61057 TTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGC--GCATGTACAAAAAGGCGGAAG 61114
||||| |||||||||||| |||| | || ||||||| |||| |||| || || |
Sbjct 619802 TTCGTGTTGTTCCCCATCAAGTACCACGAGATTTGGCAAGCAT--ACAAGCGCGCTGAGG 619745
Query 61115 CTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAG---C 61171
| || |||||||| | |||||| ||||||||||||| || || | |||||| | |
Sbjct 619744 CGTCGTTCTGGACCGCCGAGGAGATCGATTTGTCCAAGGATATTCACGACTGGAACAACC 619685
Query 61172 GTTT-ATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCG 61230
| | | ||||| |||| ||| | | ||||||||| |||||||| || ||
Sbjct 619684 GCATGAACGAGCAC-GAACGTTTCTTCCTCTCGCGTGTGTTGGCATTCTTTGCTGCGTCC 619626
Query 61231 GACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAG 61290
|||||||| ||||| ||||| || | || ||| | || || ||| | | ||
Sbjct 619625 GACGGTATTGTCAACGAGAACTTGGTCGAGAACTTCTCAGCCGAAGTTCAAATCCCAGAA 619566
Query 61291 GCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGT 61350
|| || || ||||| |||||||| ||||| || ||||||| |||| ||| |
Sbjct 619565 GCCAAGTGCTTTTACGGGTTCCAGATCATGATGGAAAACATCCACTCCGAGACCTACTCT 619506
Query 61351 GTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTG----TTCAATGC 61406
| || || || || ||||||| || | ||| || ||||| ||||||||
Sbjct 619505 CTGCTGATTGACACCTACATCAAAGACCCCAAGGA----GAGCGATTTCCTATTCAATGC 619450
Query 61407 CATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAG 61466
||| || | || || | | ||| ||| || || |||||| ||| |||||| |||
Sbjct 619449 CATTGAAAATATTCCTCAGATCAAGGAGAAGGCCGAATGGGCCATCAGATGGATC--CAG 619392
Query 61467 TACAACG--GCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTT 61524
|| | | || ||||| || ||||| | || ||||| | || || ||||| ||
Sbjct 619391 GACGAAGAGGCCCTATTTGCAGAGAGATTGGTCGCCTTTGCTGCCGTGGAAGGTGTTTTC 619332
Query 61525 TTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTG 61584
||| ||||| |||||||| || || ||| | ||||| || | |||||||||||
Sbjct 619331 TTCTCCGGATCCTTTGCCGCTATTTTCTGGCTAAAGAAGAAAGGTTTGATGCCCGGTCTA 619272
Query 61585 ACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGC-TGTTTT 61643
|| ||| |||||| | || | | |||||||| | || ||||||||| ||| ||
Sbjct 619271 ACGTTCTCTAATGAGCTAATTTGCAGAGACGAGGGTCTTCACACTGATTTTGCATGTCTT 619212
Query 61644 GCTATTCAAACGCTATCTGGTGAATCGTCC--GTCGGAGGAGCGTGTGGGTGAGATTGTT 61701
||||| ||| | || ||| || || | || || || | || || ||
Sbjct 619211 -CTATT--TGCGC-ACTTGAAGAACAAGCCTGATCCAAAGATTGT-TGAGAGA-ATCATT 619158
Query 61702 CGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATC 61761
|||||| || |||||| || || | | | || || | || || || || |
Sbjct 619157 ACTGAGGCTGTCGAAATCGAAAAGAGATATTTCATCGATGCCCTACCAGTGTCCCTACTT 619098
Query 61762 GGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTC 61821
|| ||||| | |||||| || ||| ||||||||||||||||| | ||| | ||
Sbjct 619097 GGTATGAACGCCGACCTAATGAACCAATATGTTGAATTTGTTGCCGACAGACTGCTAGTT 619038
Query 61822 GAT-TTGGGTATGAAGCGGA--TCTATAATACGAAAAACCCATTTGATTTCATGGACATG 61878
| | |||| || || | | || | |||| |||||||| ||||| ||||| |
Sbjct 619037 GCTCTTGGCAATCAAAAGTATTTCAACGTTACG---AACCCATTCGATTTTATGGAAAAC 618981
Query 61879 ATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913
||||| ||| ||| ||||| || || ||||| ||
Sbjct 618980 ATTTCTTTGGCTGGTAAGACCAACTTCTTCGAAAA 618946
>seq2
Length=1086951
Score = 116 bits (128), Expect = 3e-21
Identities = 340/524 (65%), Gaps = 0/524 (0%)
Strand=Plus/Plus
Query 66401 CCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAG 66460
||||| ||||| || | ||||| || || ||||| || | ||||||||||| | |||
Sbjct 390590 CCGTGGTTTTTCCGGATGTCGACAAAGTCGAAGATATCAGAGTGCCATGGTTCTAAGTAA 390649
Query 66461 ATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTG 66520
|| || || | || | ||| ||||||||| || ||||| ||||| ||||||
Sbjct 390650 ATTGCAAAAGCACCTGGTCTCTTGTTGCCACCTTGATCAACGTAACGAGCAGTGTTGTTG 390709
Query 66521 AAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGAT 66580
| ||||| | ||| || | | || || || | || ||||| || | ||| |||
Sbjct 390710 TATACACGAACCATGGGGATAATACCATTCGAAGTACCGTTGGTACCTGCAATGTAGGAG 390769
Query 66581 CCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCA 66640
||| | || || | ||| | | || || ||||| || || ||||| |||||
Sbjct 390770 CCTGTAGAACGAATGTTGTGGATGTGCAATCCGATACCGCCCGCAGTCTTGGAGATCATG 390829
Query 66641 GCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGG 66700
||||| || || || | | || || || |||||||| | || |||| | |||
Sbjct 390830 GCACATTCTTTCAAAGTATCGTAGATACCTTCGATGGAGTCCTCTTTCATGGCTACCAGG 390889
Query 66701 TAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGC 66760
| || ||| | || || | || || |||| ||| | ||||| | |||||
Sbjct 390890 AAACAGGAAGACATCTGAGGATGAGGAGTACCGGCGTTGAATAACGTGGGCGATGCGTGA 390949
Query 66761 GTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCA 66820
|| || || |||||||| |||||| || |||| || || |||| |||
Sbjct 390950 GTGAAATATCTTAGAGACATGAGATTGTAGGTTTCGAGCACTCTTTCGATGTCGCGGCCG 391009
Query 66821 TGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTG 66880
|| || |||| ||| ||||| | | | ||||| ||||| | | | | | |
Sbjct 391010 TGGATACCGACGGCAACACGCATGATCAAATGCTGAGGACGTTCTGCGACTTTACCATCG 391069
Query 66881 ATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924
||| | | |||||| || ||||| |||||||||| |||||| ||
Sbjct 391070 ATACGGAGTAAGTACGAACGTTCTAGGGTCTTGAAACCAAAATA 391113
>seq7
Length=1626734
Score = 98.7 bits (108), Expect = 8e-16
Identities = 157/223 (70%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399
|||||||| ||||| |||||||| || ||||| ||||| ||||||| || || |
Sbjct 862059 CATAAATAAGTCAGGAATCCAGAGAGCATAGAAAAGATCCCGTGCTCTCAATTCTTCTTT 862118
Query 66400 GCCGTGATTTTTGCGCAAGTCG-AGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGT 66458
|| || || || || |||| | | || ||||| ||||| |||||| || || ||||
Sbjct 862119 TCCATGGTTCTTCCG-AAGTTGTAAAAAGTCAAAAATGTCACAATGCCAAGGCTCTAGGT 862177
Query 66459 AGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGT 66518
| ||| || | ||| | || |||||||| || ||||||||||| ||||
Sbjct 862178 ATATGCAAAAGGCACCCGGCCTCTTATTCCCACCTTGATCAACGTAGCGAGCTGTGTTGT 862237
Query 66519 TGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATT 66561
|||| ||||| | ||| || || || || || || |||||||
Sbjct 862238 TGAAAACACGTAGCATAGGAACCAGACCATTCGAAGTGCCATT 862280
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567961237120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |