Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1 190 2e-43 seq2 116 3e-21 seq7 98.7 8e-16 >seq1 Length=762788 Score = 190 bits (210), Expect = 2e-43 Identities = 579/875 (66%), Gaps = 36/875 (4%) Strand=Plus/Minus Query 61057 TTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGC--GCATGTACAAAAAGGCGGAAG 61114 ||||| |||||||||||| |||| | || ||||||| |||| |||| || || | Sbjct 619802 TTCGTGTTGTTCCCCATCAAGTACCACGAGATTTGGCAAGCAT--ACAAGCGCGCTGAGG 619745 Query 61115 CTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAG---C 61171 | || |||||||| | |||||| ||||||||||||| || || | |||||| | | Sbjct 619744 CGTCGTTCTGGACCGCCGAGGAGATCGATTTGTCCAAGGATATTCACGACTGGAACAACC 619685 Query 61172 GTTT-ATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCG 61230 | | | ||||| |||| ||| | | ||||||||| |||||||| || || Sbjct 619684 GCATGAACGAGCAC-GAACGTTTCTTCCTCTCGCGTGTGTTGGCATTCTTTGCTGCGTCC 619626 Query 61231 GACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAG 61290 |||||||| ||||| ||||| || | || ||| | || || ||| | | || Sbjct 619625 GACGGTATTGTCAACGAGAACTTGGTCGAGAACTTCTCAGCCGAAGTTCAAATCCCAGAA 619566 Query 61291 GCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGT 61350 || || || ||||| |||||||| ||||| || ||||||| |||| ||| | Sbjct 619565 GCCAAGTGCTTTTACGGGTTCCAGATCATGATGGAAAACATCCACTCCGAGACCTACTCT 619506 Query 61351 GTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTG----TTCAATGC 61406 | || || || || ||||||| || | ||| || ||||| |||||||| Sbjct 619505 CTGCTGATTGACACCTACATCAAAGACCCCAAGGA----GAGCGATTTCCTATTCAATGC 619450 Query 61407 CATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAG 61466 ||| || | || || | | ||| ||| || || |||||| ||| |||||| ||| Sbjct 619449 CATTGAAAATATTCCTCAGATCAAGGAGAAGGCCGAATGGGCCATCAGATGGATC--CAG 619392 Query 61467 TACAACG--GCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTT 61524 || | | || ||||| || ||||| | || ||||| | || || ||||| || Sbjct 619391 GACGAAGAGGCCCTATTTGCAGAGAGATTGGTCGCCTTTGCTGCCGTGGAAGGTGTTTTC 619332 Query 61525 TTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTG 61584 ||| ||||| |||||||| || || ||| | ||||| || | ||||||||||| Sbjct 619331 TTCTCCGGATCCTTTGCCGCTATTTTCTGGCTAAAGAAGAAAGGTTTGATGCCCGGTCTA 619272 Query 61585 ACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGC-TGTTTT 61643 || ||| |||||| | || | | |||||||| | || ||||||||| ||| || Sbjct 619271 ACGTTCTCTAATGAGCTAATTTGCAGAGACGAGGGTCTTCACACTGATTTTGCATGTCTT 619212 Query 61644 GCTATTCAAACGCTATCTGGTGAATCGTCC--GTCGGAGGAGCGTGTGGGTGAGATTGTT 61701 ||||| ||| | || ||| || || | || || || | || || || Sbjct 619211 -CTATT--TGCGC-ACTTGAAGAACAAGCCTGATCCAAAGATTGT-TGAGAGA-ATCATT 619158 Query 61702 CGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATC 61761 |||||| || |||||| || || | | | || || | || || || || | Sbjct 619157 ACTGAGGCTGTCGAAATCGAAAAGAGATATTTCATCGATGCCCTACCAGTGTCCCTACTT 619098 Query 61762 GGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTC 61821 || ||||| | |||||| || ||| ||||||||||||||||| | ||| | || Sbjct 619097 GGTATGAACGCCGACCTAATGAACCAATATGTTGAATTTGTTGCCGACAGACTGCTAGTT 619038 Query 61822 GAT-TTGGGTATGAAGCGGA--TCTATAATACGAAAAACCCATTTGATTTCATGGACATG 61878 | | |||| || || | | || | |||| |||||||| ||||| ||||| | Sbjct 619037 GCTCTTGGCAATCAAAAGTATTTCAACGTTACG---AACCCATTCGATTTTATGGAAAAC 618981 Query 61879 ATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913 ||||| ||| ||| ||||| || || ||||| || Sbjct 618980 ATTTCTTTGGCTGGTAAGACCAACTTCTTCGAAAA 618946 >seq2 Length=1086951 Score = 116 bits (128), Expect = 3e-21 Identities = 340/524 (65%), Gaps = 0/524 (0%) Strand=Plus/Plus Query 66401 CCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAG 66460 ||||| ||||| || | ||||| || || ||||| || | ||||||||||| | ||| Sbjct 390590 CCGTGGTTTTTCCGGATGTCGACAAAGTCGAAGATATCAGAGTGCCATGGTTCTAAGTAA 390649 Query 66461 ATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTG 66520 || || || | || | ||| ||||||||| || ||||| ||||| |||||| Sbjct 390650 ATTGCAAAAGCACCTGGTCTCTTGTTGCCACCTTGATCAACGTAACGAGCAGTGTTGTTG 390709 Query 66521 AAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGAT 66580 | ||||| | ||| || | | || || || | || ||||| || | ||| ||| Sbjct 390710 TATACACGAACCATGGGGATAATACCATTCGAAGTACCGTTGGTACCTGCAATGTAGGAG 390769 Query 66581 CCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCA 66640 ||| | || || | ||| | | || || ||||| || || ||||| ||||| Sbjct 390770 CCTGTAGAACGAATGTTGTGGATGTGCAATCCGATACCGCCCGCAGTCTTGGAGATCATG 390829 Query 66641 GCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGG 66700 ||||| || || || | | || || || |||||||| | || |||| | ||| Sbjct 390830 GCACATTCTTTCAAAGTATCGTAGATACCTTCGATGGAGTCCTCTTTCATGGCTACCAGG 390889 Query 66701 TAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGC 66760 | || ||| | || || | || || |||| ||| | ||||| | ||||| Sbjct 390890 AAACAGGAAGACATCTGAGGATGAGGAGTACCGGCGTTGAATAACGTGGGCGATGCGTGA 390949 Query 66761 GTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCA 66820 || || || |||||||| |||||| || |||| || || |||| ||| Sbjct 390950 GTGAAATATCTTAGAGACATGAGATTGTAGGTTTCGAGCACTCTTTCGATGTCGCGGCCG 391009 Query 66821 TGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTG 66880 || || |||| ||| ||||| | | | ||||| ||||| | | | | | | Sbjct 391010 TGGATACCGACGGCAACACGCATGATCAAATGCTGAGGACGTTCTGCGACTTTACCATCG 391069 Query 66881 ATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924 ||| | | |||||| || ||||| |||||||||| |||||| || Sbjct 391070 ATACGGAGTAAGTACGAACGTTCTAGGGTCTTGAAACCAAAATA 391113 >seq7 Length=1626734 Score = 98.7 bits (108), Expect = 8e-16 Identities = 157/223 (70%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 |||||||| ||||| |||||||| || ||||| ||||| ||||||| || || | Sbjct 862059 CATAAATAAGTCAGGAATCCAGAGAGCATAGAAAAGATCCCGTGCTCTCAATTCTTCTTT 862118 Query 66400 GCCGTGATTTTTGCGCAAGTCG-AGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGT 66458 || || || || || |||| | | || ||||| ||||| |||||| || || |||| Sbjct 862119 TCCATGGTTCTTCCG-AAGTTGTAAAAAGTCAAAAATGTCACAATGCCAAGGCTCTAGGT 862177 Query 66459 AGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGT 66518 | ||| || | ||| | || |||||||| || ||||||||||| |||| Sbjct 862178 ATATGCAAAAGGCACCCGGCCTCTTATTCCCACCTTGATCAACGTAGCGAGCTGTGTTGT 862237 Query 66519 TGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATT 66561 |||| ||||| | ||| || || || || || || ||||||| Sbjct 862238 TGAAAACACGTAGCATAGGAACCAGACCATTCGAAGTGCCATT 862280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567961237120