Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq5 387 3e-105
>seq5
Length=910667
Score = 387 bits (428), Expect = 3e-105
Identities = 280/320 (88%), Gaps = 8/320 (3%)
Strand=Plus/Minus
Query 1 TACTTGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCC- 59
|||| | ||| |||||||||||||||||| | || | | ||| | ||| ||
Sbjct 12432 TACTGGATCCAACCGGGCCTTTCCTTCTGGCTAACCTTGGGGC----ACTTG-TGTCCCT 12378
Query 60 -GGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGA 118
|| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 12377 TGGCGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGATTGCTCGA 12318
Query 119 ATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC 178
||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 12317 ATATATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGAC 12258
Query 179 CGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAAT 238
| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 12257 CATCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAAT 12198
Query 239 TCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAAT 298
||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||
Sbjct 12197 TCTTGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAAT 12138
Query 299 CAGTGAACGAAAGTTAGGGG 318
|| ||||||||||||||||
Sbjct 12137 CA-AGAACGAAAGTTAGGGG 12119
Score = 210 bits (232), Expect = 4e-52
Identities = 136/148 (92%), Gaps = 1/148 (1%)
Strand=Plus/Minus
Query 171 TCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGA 230
||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct 20840 TCTAGGACCATCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGA 20781
Query 231 GGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTT 290
||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||
Sbjct 20780 GGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTT 20721
Query 291 TCATTAATCAGTGAACGAAAGTTAGGGG 318
|||||||||| ||||||||||||||||
Sbjct 20720 TCATTAATCA-AGAACGAAAGTTAGGGG 20694
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915199780352
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |