Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq5 387 3e-105 >seq5 Length=910667 Score = 387 bits (428), Expect = 3e-105 Identities = 280/320 (88%), Gaps = 8/320 (3%) Strand=Plus/Minus Query 1 TACTTGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCC- 59 |||| | ||| |||||||||||||||||| | || | | ||| | ||| || Sbjct 12432 TACTGGATCCAACCGGGCCTTTCCTTCTGGCTAACCTTGGGGC----ACTTG-TGTCCCT 12378 Query 60 -GGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGA 118 || || ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 12377 TGGCGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGATTGCTCGA 12318 Query 119 ATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC 178 ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 12317 ATATATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGAC 12258 Query 179 CGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAAT 238 | |||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct 12257 CATCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAAT 12198 Query 239 TCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAAT 298 ||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||| Sbjct 12197 TCTTGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAAT 12138 Query 299 CAGTGAACGAAAGTTAGGGG 318 || |||||||||||||||| Sbjct 12137 CA-AGAACGAAAGTTAGGGG 12119 Score = 210 bits (232), Expect = 4e-52 Identities = 136/148 (92%), Gaps = 1/148 (1%) Strand=Plus/Minus Query 171 TCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGA 230 ||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct 20840 TCTAGGACCATCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGA 20781 Query 231 GGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTT 290 ||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||| Sbjct 20780 GGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTT 20721 Query 291 TCATTAATCAGTGAACGAAAGTTAGGGG 318 |||||||||| |||||||||||||||| Sbjct 20720 TCATTAATCA-AGAACGAAAGTTAGGGG 20694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915199780352