Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq8 379 4e-103 seq3 129 1e-27 >seq8 Length=1778692 Score = 379 bits (420), Expect = 4e-103 Identities = 270/308 (88%), Gaps = 9/308 (3%) Strand=Plus/Minus Query 13 CCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCC--GGGGAGCCAGG 70 |||||||||||||||||| | || | |||| ||| || || || ||||| Sbjct 1611931 CCGGGCCTTTCCTTCTGGCTAACCTTGGGTCCTT------GTGGCCCTTGGCGAACCAGG 1611878 Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCAT 130 |||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||| Sbjct 1611877 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGATAGCTCGAATATATTAGCAT 1611818 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct 1611817 GGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGAT 1611758 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1611757 TAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 1611698 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||||||||||||||||||||| || ||||||| |||||||||||||| |||||||| Sbjct 1611697 TGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAAA 1611639 Query 311 GTTAGGGG 318 |||||||| Sbjct 1611638 GTTAGGGG 1611631 Score = 379 bits (420), Expect = 4e-103 Identities = 270/308 (88%), Gaps = 9/308 (3%) Strand=Plus/Minus Query 13 CCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCC--GGGGAGCCAGG 70 |||||||||||||||||| | || | |||| ||| || || || ||||| Sbjct 1620229 CCGGGCCTTTCCTTCTGGCTAACCTTGGGTCCTT------GTGGCCCTTGGCGAACCAGG 1620176 Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCAT 130 |||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||| Sbjct 1620175 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGATAGCTCGAATATATTAGCAT 1620116 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct 1620115 GGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGAT 1620056 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1620055 TAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 1619996 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||||||||||||||||||||| || ||||||| |||||||||||||| |||||||| Sbjct 1619995 TGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAAA 1619937 Query 311 GTTAGGGG 318 |||||||| Sbjct 1619936 GTTAGGGG 1619929 >seq3 Length=1032804 Score = 129 bits (142), Expect = 1e-27 Identities = 88/99 (89%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 147 ACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGG 206 |||| |||||||||||||||||||||||||| ||||||||||||||||||| || | Sbjct 986888 ACGTTTGGTTCTATTTTGTTGGTTTCTAGGACGATCGTAATGATTAATAGGGATGATCAG 986947 Query 207 GGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 ||| ||| |||||||||||||||||||||||||||||| Sbjct 986948 GGGCATCATTATTCAATTGTCAGAGGTGAAATTCTTGGA 986986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915199926784