Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq8 208 6e-49 seq5 89.7 4e-13 >seq8 Length=1778692 Score = 208 bits (230), Expect = 6e-49 Identities = 382/551 (69%), Gaps = 19/551 (3%) Strand=Plus/Plus Query 61051 CGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCG 61110 ||||| ||||| |||||||| ||| | ||| | || || |||| |||||| ||| Sbjct 705079 CGTCGGTTCGTGTTGTTCCCGATCAAATATCACGAGATCTGGCAGGCGTACAAGCGGGCA 705138 Query 61111 GAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAG 61170 || || || |||||||||| |||||| ||||||||||||| ||| || | |||||| | Sbjct 705139 GAGGCGTCGTTCTGGACGGCAGAGGAGATCGATTTGTCCAAGGACTTGCACGACTGGAAC 705198 Query 61171 ---CGTTT-ATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGC 61226 ||| | | |||| || | ||| || || |||| | ||||| || || || Sbjct 705199 AACCGTATGAACGAGAAC-GAGCGGTTCTTCCTTTCACGTGTGCTTGCGTTTTTCGCTGC 705257 Query 61227 TTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTC-GCGCAGGAGGTGCAAGTGT 61285 |||||||||||| || || || ||| | ||||| ||| |||| || |||||| | Sbjct 705258 TTCGGACGGTATTGTGAACGAAAATCTCGTGGAAAACTTCTCCGCA-GAAGTGCAAATTC 705316 Query 61286 CGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGT 61345 | ||||| ||||||||||| |||||||| |||||||| ||||||| || | || Sbjct 705317 CAGAGGCCAAATGTTTCTACGGGTTCCAGATCATGATGGAGAACATCCACTCCGAAACGT 705376 Query 61346 ACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGA----TTGTTC 61401 || | ||||||||||| ||||||| ||| | || | |||||| |||||| Sbjct 705377 ACTCGTTGCTCATCGATACCTACATCAAGGA----CCCTAAGGAGAACGAATTTTTGTTC 705432 Query 61402 AATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATC 61461 ||||| || |||| || || | | || ||| || || ||||| ||| ||||| Sbjct 705433 AATGCGATTGAGAACATCCCCCAGATAAAAGAGAAGGCCGAATGGGCGATCAGATGGAT- 705491 Query 61462 ACCAGTACAACG--GCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTG 61519 ||| || ||| || || | ||||| | | || || || | ||||| |||| Sbjct 705492 -TCAGGACGACGAAGCGTTGTTCGCGGAACGGCTCGTAGCGTTCGCCGCTGTCGAAGGTG 705550 Query 61520 TATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCG 61579 | |||||| || |||||||| || || || |||||||| || || |||||||||| Sbjct 705551 TGTTTTTCTCAGGTTCGTTTGCGGCCATTTTCTGGTTGAAAAAGAAGGGTCTTATGCCCG 705610 Query 61580 GTCTGACCTTC 61590 | || || ||| Sbjct 705611 GACTCACGTTC 705621 >seq5 Length=1414338 Score = 89.7 bits (98), Expect = 4e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491 |||||||| ||||||||||||||||| || ||||| || ||| || ||||| || Sbjct 886483 TGGAACTCACCGGACAGTACACGACGAGAGTACATGTTAGATGTGTAAGGCTCAAAACAT 886424 Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGC 65538 ||| |||| || | |||||| | ||||||||| |||||||| || || Sbjct 886423 TCATTGTTACCCAAAATTTGCGAAGTAGATGCCGTTGGCATTGGCGC 886377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567961237120