Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq109 306 2e-80 seq123 165 3e-38 seq68 159 1e-36 >seq109 Length=6174 Score = 306 bits (338), Expect = 2e-80 Identities = 256/309 (83%), Gaps = 10/309 (3%) Strand=Plus/Minus Query 378 CTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTA 437 ||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||| Sbjct 2760 CTAGGATGCTGGCGTAATGGTTGCAAGTCGCCCGTCTTGAAACACGGACCAAGGAGTCTA 2701 Query 438 ACATCTATGCGAGTGTTTGGGTGTC--AAACCCGTGCGCGTAATGAAAGTGAACGGAGGT 495 || |||||||||||||||| || || |||||| |||| ||||||||| | |||| Sbjct 2700 ACGTCTATGCGAGTGTTTGAGTTTCCAAAACCCAAACGCGCAATGAAAGTAATAGGAGC- 2642 Query 496 GGGAACCCGTGAGGGTGCACCATCGACCG-ATCCTGATGTCTTCGGATGGATTTGAGTAA 554 ||||| | | |||||| | ||||| ||| | | || ||| ||||||| Sbjct 2641 --GAACCGGCAACGGTGCAGCTCCGACCACATCAAG--GCCTAAACCCTGATGTGAGTAA 2586 Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 | ||| |||||||||||||||||||||||||||||| | || ||||||||||||||||| Sbjct 2585 G--CATGGCTGTTGGGACCCGAAAGATGGTGAACTATACTTGGATAGGGTGAAGCCAGAG 2528 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 |||||||||||||||||||| |||||||||| ||||||||||||||||| ||| || ||| Sbjct 2527 GAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATCTGAGTA 2468 Query 675 TAGGGGCGA 683 ||||||||| Sbjct 2467 TAGGGGCGA 2459 Score = 253 bits (280), Expect = 8e-65 Identities = 160/173 (92%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||||||||||||||||||||||||||| |||| |||||||| | ||||||||||||| Sbjct 3054 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAAT 2995 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 |||||| |||||||||||||| ||||||| |||||| |||||||||||||||||||| || Sbjct 2994 ATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGCACTTTGAAA 2935 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGAC 212 ||||||| |||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct 2934 AGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGCAAGCAGAC 2882 >seq123 Length=669210 Score = 165 bits (182), Expect = 3e-38 Identities = 120/138 (87%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 544 GATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGG 603 ||| |||||||| ||| ||||||||| ||||||||||||| || ||| | || |||||| Sbjct 508822 GATGTGAGTAAG--CATGGCTGTTGGGGCCCGAAAGATGGTAAATTATACTTGGATAGGG 508765 Query 604 TGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTC 663 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct 508764 TGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGATGTGCAAATCGATCGTC 508705 Query 664 AAATTTGGGTATAGGGGC 681 | | || || ||||||| Sbjct 508704 GAGTCTGAGTGTAGGGGC 508687 >seq68 Length=1116518 Score = 159 bits (176), Expect = 1e-36 Identities = 137/167 (82%), Gaps = 7/167 (4%) Strand=Plus/Plus Query 45 GAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGG 104 |||||||||||||||||| |||||| |||| |||||||| | || ||| |||||| ||| Sbjct 573263 GAGTTGTTTGGGAATGCACCTCTAAGTGGGTGGTAAATTCCAACTCAAGATAAATACTGG 573322 Query 105 CCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGA 164 | | ||||||| | ||||| | |||||| |||||||||||||| | ||| || ||| Sbjct 573323 CGATAGACCGA----GAACAAGAACAGTGATGGAAAGATGAAAAGCTCATTG--AAAAGA 573376 Query 165 GTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGA 211 |||||||| | |||||||||||| |||||||| |||||||| |||| Sbjct 573377 GTTAAAAA-AAAGTGAAATTGTTGGAAGGGAAGGGCTTGCAAGCAGA 573422 Score = 129 bits (142), Expect = 2e-27 Identities = 206/308 (67%), Gaps = 52/308 (17%) Strand=Plus/Plus Query 378 CTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTA 437 ||||||||||||||||||||||| ||| |||||||||| |||||||||||| ||| || Sbjct 573543 CTAGGATGCTGGCGTAATGGTTGCAAGTCGCCCGTCTTGAAACACGGACCAATGAGGTTA 573602 Query 438 ACATCTATGCGAGTGTTTGGGT--GTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGT 495 || | |||||||||||||| || || || |||| ||||||| | | ||| Sbjct 573603 ACGTATATGCGAGTGTTTGAGTAATACATTTCCAAACGCGCAATGAAAATTA---TAGGG 573659 Query 496 GGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAG 555 | ||| | | | |||||| Sbjct 573660 GCGAATCTGCAAAGGTGCA----------------------------------------- 573678 Query 556 AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGG 615 |||||| ||||| | |||||||| ||||| || ||| |||||| ||||||| Sbjct 573679 ------GCTGTTCAGACCCTACAGATGGTGCACTATATTTGGATATGGTGAATCCAGAGG 573732 Query 616 AAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTAT 675 |||||||||||||||||| |||||| || ||| |||||| |||||| ||| ||||||| Sbjct 573733 GAACTCTGGTGGAGGCTCGTAGCGGTATTGACGTTCAAATCAATCGTCGAATCTGGGTAT 573792 Query 676 AGGGGCGA 683 | |||||| Sbjct 573793 ATGGGCGA 573800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079996696700