Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03-
29] 154 sequences; 14,350,841 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq109 306 2e-80
seq123 165 3e-38
seq68 159 1e-36
>seq109
Length=6174
Score = 306 bits (338), Expect = 2e-80
Identities = 256/309 (83%), Gaps = 10/309 (3%)
Strand=Plus/Minus
Query 378 CTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTA 437
||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||
Sbjct 2760 CTAGGATGCTGGCGTAATGGTTGCAAGTCGCCCGTCTTGAAACACGGACCAAGGAGTCTA 2701
Query 438 ACATCTATGCGAGTGTTTGGGTGTC--AAACCCGTGCGCGTAATGAAAGTGAACGGAGGT 495
|| |||||||||||||||| || || |||||| |||| ||||||||| | ||||
Sbjct 2700 ACGTCTATGCGAGTGTTTGAGTTTCCAAAACCCAAACGCGCAATGAAAGTAATAGGAGC- 2642
Query 496 GGGAACCCGTGAGGGTGCACCATCGACCG-ATCCTGATGTCTTCGGATGGATTTGAGTAA 554
||||| | | |||||| | ||||| ||| | | || ||| |||||||
Sbjct 2641 --GAACCGGCAACGGTGCAGCTCCGACCACATCAAG--GCCTAAACCCTGATGTGAGTAA 2586
Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614
| ||| |||||||||||||||||||||||||||||| | || |||||||||||||||||
Sbjct 2585 G--CATGGCTGTTGGGACCCGAAAGATGGTGAACTATACTTGGATAGGGTGAAGCCAGAG 2528
Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674
|||||||||||||||||||| |||||||||| ||||||||||||||||| ||| || |||
Sbjct 2527 GAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATCTGAGTA 2468
Query 675 TAGGGGCGA 683
|||||||||
Sbjct 2467 TAGGGGCGA 2459
Score = 253 bits (280), Expect = 8e-65
Identities = 160/173 (92%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||||||||||||||||||||||||||| |||| |||||||| | |||||||||||||
Sbjct 3054 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAAT 2995
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
|||||| |||||||||||||| ||||||| |||||| |||||||||||||||||||| ||
Sbjct 2994 ATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGCACTTTGAAA 2935
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGAC 212
||||||| |||||| ||||||||||||||||||||||| |||||||| |||||
Sbjct 2934 AGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGCAAGCAGAC 2882
>seq123
Length=669210
Score = 165 bits (182), Expect = 3e-38
Identities = 120/138 (87%), Gaps = 2/138 (1%)
Strand=Plus/Minus
Query 544 GATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGG 603
||| |||||||| ||| ||||||||| ||||||||||||| || ||| | || ||||||
Sbjct 508822 GATGTGAGTAAG--CATGGCTGTTGGGGCCCGAAAGATGGTAAATTATACTTGGATAGGG 508765
Query 604 TGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTC 663
||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct 508764 TGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGATGTGCAAATCGATCGTC 508705
Query 664 AAATTTGGGTATAGGGGC 681
| | || || |||||||
Sbjct 508704 GAGTCTGAGTGTAGGGGC 508687
>seq68
Length=1116518
Score = 159 bits (176), Expect = 1e-36
Identities = 137/167 (82%), Gaps = 7/167 (4%)
Strand=Plus/Plus
Query 45 GAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGG 104
|||||||||||||||||| |||||| |||| |||||||| | || ||| |||||| |||
Sbjct 573263 GAGTTGTTTGGGAATGCACCTCTAAGTGGGTGGTAAATTCCAACTCAAGATAAATACTGG 573322
Query 105 CCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGA 164
| | ||||||| | ||||| | |||||| |||||||||||||| | ||| || |||
Sbjct 573323 CGATAGACCGA----GAACAAGAACAGTGATGGAAAGATGAAAAGCTCATTG--AAAAGA 573376
Query 165 GTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGA 211
|||||||| | |||||||||||| |||||||| |||||||| ||||
Sbjct 573377 GTTAAAAA-AAAGTGAAATTGTTGGAAGGGAAGGGCTTGCAAGCAGA 573422
Score = 129 bits (142), Expect = 2e-27
Identities = 206/308 (67%), Gaps = 52/308 (17%)
Strand=Plus/Plus
Query 378 CTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTA 437
||||||||||||||||||||||| ||| |||||||||| |||||||||||| ||| ||
Sbjct 573543 CTAGGATGCTGGCGTAATGGTTGCAAGTCGCCCGTCTTGAAACACGGACCAATGAGGTTA 573602
Query 438 ACATCTATGCGAGTGTTTGGGT--GTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGT 495
|| | |||||||||||||| || || || |||| ||||||| | | |||
Sbjct 573603 ACGTATATGCGAGTGTTTGAGTAATACATTTCCAAACGCGCAATGAAAATTA---TAGGG 573659
Query 496 GGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAG 555
| ||| | | | ||||||
Sbjct 573660 GCGAATCTGCAAAGGTGCA----------------------------------------- 573678
Query 556 AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGG 615
|||||| ||||| | |||||||| ||||| || ||| |||||| |||||||
Sbjct 573679 ------GCTGTTCAGACCCTACAGATGGTGCACTATATTTGGATATGGTGAATCCAGAGG 573732
Query 616 AAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTAT 675
|||||||||||||||||| |||||| || ||| |||||| |||||| ||| |||||||
Sbjct 573733 GAACTCTGGTGGAGGCTCGTAGCGGTATTGACGTTCAAATCAATCGTCGAATCTGGGTAT 573792
Query 676 AGGGGCGA 683
| ||||||
Sbjct 573793 ATGGGCGA 573800
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079996696700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |