Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq109 603 3e-170 seq73 178 4e-42 seq68 116 1e-23 seq69 113 1e-22 seq81 89.7 2e-15 >seq109 Length=6174 Score = 603 bits (668), Expect = 3e-170 Identities = 458/538 (85%), Gaps = 23/538 (4%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 733 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATT 792 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||| ||| |||| | || Sbjct 793 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCATTAGACGGTGTCTAGAGCC------ 846 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 || | | ||| | ||| | ||| | ||| || ||||| | Sbjct 847 -------GATGTA---TAATACTTGAAGGTAGTCTTTC--GACAGGTCATCCTTCACTCT 894 Query 187 TTAAGTaaaaaaaCGATAAG-GGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTT 245 ||||||||| || | ||| ||| | |||||||||| |||||| | |||||| | | Sbjct 895 GTAAGTAAAAGAAT-AGAAGAGGTGGGGGTATTTCACGGGCGCCGGA---GCTCCCCCCT 950 Query 246 ATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305 || ||||||| || || |||||||| ||| |||||||||||||||||||||||||| Sbjct 951 ATACTACACCCTCCACATCCTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTT 1010 Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1011 CTTTCCCCGCTGATTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 1070 Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1071 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 1130 Query 426 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1131 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 1190 Query 486 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1191 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 1248 >seq73 Length=169253 Score = 178 bits (196), Expect = 4e-42 Identities = 220/292 (75%), Gaps = 17/292 (6%) Strand=Plus/Minus Query 253 ACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCC 312 ||||| || || ||| |||| ||| ||| ||| || |||||| ||||||| | || ||| Sbjct 134095 ACCTC-CATATCTTTTGACAACGTCAGACCAGAATCGAGCTCAGCAGGGTCAT-TTCCCC 134038 Query 313 CGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT-AGATAGTAGATAGGGAC 371 |||||||| |||| ||| ||||||||| |||||| |||| | ||| || ||||| | | Sbjct 134037 CGCTGATTTTGCCA-GCCTGTTCCCTTGCCTGTGGCTTCGTTGAGA-AGAAGATATGACC 133980 Query 372 AGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCT 431 ||| |||||| ||| || ||||||||| |||||| ||||||| ||||||||| |||| Sbjct 133979 GGTGTGAATCTGGTTCATACATTCATGCATGTCACTTATTAGATTCCGAGGCATT-GGCT 133921 Query 432 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACT 491 ||||| | || ||||||||| ||||| ||| || | |||||| ||||| Sbjct 133920 ACCTTGGGTGAATCATAGTTATCCCCGCAGTT--CCAACTCTTGGT--------TTCACA 133871 Query 492 TTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 || |||| | ||||||||| |||| |||||||| ||| |||||||| Sbjct 133870 AATCCACTCAGCGAACTGGGCAGGTATCATGTTGCGTCAGCAT-ACTTTCTG 133820 Score = 102 bits (112), Expect = 3e-19 Identities = 111/144 (77%), Gaps = 10/144 (7%) Strand=Plus/Minus Query 341 GCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCG 400 |||||| | ||||| |||||||||| | || |||| ||||| | ||||||| | Sbjct 169188 GCTGTG-TCTCGCTGGATAGTAGATGGTAACTGTGGAAATCT----ATTCCATTC----G 169138 Query 401 CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC 460 ||||||||| | |||||||| | | ||||||||||| || ||||| ||| || ||||| Sbjct 169137 CGTCACTAACTTGATGACGAAGAAATTGGCTACCTTGTGATGGTCATTGTTCCT-CCGCC 169079 Query 461 GTTTACCCGCGCTTGGTTGAATTT 484 | | ||| |||| ||||||||||| Sbjct 169078 GGTCACCTGCGCCTGGTTGAATTT 169055 >seq68 Length=1116518 Score = 116 bits (128), Expect = 1e-23 Identities = 152/206 (74%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 333 TTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCA 392 ||||||||||| |||||||| || |||||| ||||||| || ||| ||| ||| Sbjct 865092 TTCCCTTGGCTTCGGTTTCGCAGAATTGTAGATGGGGACAGCGG---TCTTTGTAACCCA 865036 Query 393 TTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTA 452 |||| ||||||||| ||||| | |||| ||||| || ||| ||| |||||| || Sbjct 865035 TTCAATTGCGTCACTACTTAGACCATGAGG-ATTTGCCTGTCTTGAGAAAGTCATGCCTA 864977 Query 453 CTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGC 512 || || ||| || | || | || |||| | || | || ||||||| ||||||||| | Sbjct 864976 CTTCCACCGAATATCTGCAATCGGCCGAATCT-TTGAATTAGACATTCGGAGCACTGGAC 864918 Query 513 AGAAATCACATTGCGTCAACATCACT 538 ||||| || |||| |||| |||||| Sbjct 864917 AGAAA-CAGCTTGCCTCAAAATCACT 864893 >seq69 Length=221780 Score = 113 bits (124), Expect = 1e-22 Identities = 115/147 (78%), Gaps = 10/147 (7%) Strand=Plus/Plus Query 341 GCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCG 400 |||||| | ||||| |||||||||| | || |||| ||||| | ||||||| | Sbjct 5618 GCTGTG-TCTCGCTGGATAGTAGATGGTAACTGTGGAAATCT----ATTCCATTC----G 5668 Query 401 CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC 460 ||||||||| |||||||||||| | ||||||||||| || |||||| ||| || ||||| Sbjct 5669 CGTCACTAACTAGATGACGAGGAAATTGGCTACCTTGTGATAGTCATTGTTCCT-CCGCC 5727 Query 461 GTTTACCCGCGCTTGGTTGAATTTCTT 487 | | || |||| ||||||||||| || Sbjct 5728 GGTCTCCTGCGCCTGGTTGAATTTATT 5754 >seq81 Length=138817 Score = 89.7 bits (98), Expect = 2e-15 Identities = 110/147 (75%), Gaps = 10/147 (7%) Strand=Plus/Plus Query 341 GCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCG 400 |||||| | ||||| |||||||||| | || |||| ||||| | ||||||| | Sbjct 6801 GCTGTG-TCTCGCTGGATAGTAGATGGTAACTGTGGAAATCT----ATTCCATTC----G 6851 Query 401 CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC 460 ||||||| | | |||||||| | | | ||||||||| || | ||| ||| |||| ||| Sbjct 6852 CGTCACTTACTTGATGACGAAGAAATAGGCTACCTTGTGATGGACATTGTTCCTCC-GCC 6910 Query 461 GTTTACCCGCGCTTGGTTGAATTTCTT 487 | | ||| |||| ||||||||||| || Sbjct 6911 GGTCACCTGCGCCTGGTTGAATTTATT 6937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635197481792