Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03-
29] 154 sequences; 14,350,841 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq109 603 3e-170
seq73 178 4e-42
seq68 116 1e-23
seq69 113 1e-22
seq81 89.7 2e-15
>seq109
Length=6174
Score = 603 bits (668), Expect = 3e-170
Identities = 458/538 (85%), Gaps = 23/538 (4%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 733 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATT 792
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||| ||| |||| | ||
Sbjct 793 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCATTAGACGGTGTCTAGAGCC------ 846
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
|| | | ||| | ||| | ||| | ||| || ||||| |
Sbjct 847 -------GATGTA---TAATACTTGAAGGTAGTCTTTC--GACAGGTCATCCTTCACTCT 894
Query 187 TTAAGTaaaaaaaCGATAAG-GGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTT 245
||||||||| || | ||| ||| | |||||||||| |||||| | |||||| | |
Sbjct 895 GTAAGTAAAAGAAT-AGAAGAGGTGGGGGTATTTCACGGGCGCCGGA---GCTCCCCCCT 950
Query 246 ATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305
|| ||||||| || || |||||||| ||| ||||||||||||||||||||||||||
Sbjct 951 ATACTACACCCTCCACATCCTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTT 1010
Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1011 CTTTCCCCGCTGATTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 1070
Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1071 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 1130
Query 426 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1131 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 1190
Query 486 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1191 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 1248
>seq73
Length=169253
Score = 178 bits (196), Expect = 4e-42
Identities = 220/292 (75%), Gaps = 17/292 (6%)
Strand=Plus/Minus
Query 253 ACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCC 312
||||| || || ||| |||| ||| ||| ||| || |||||| ||||||| | || |||
Sbjct 134095 ACCTC-CATATCTTTTGACAACGTCAGACCAGAATCGAGCTCAGCAGGGTCAT-TTCCCC 134038
Query 313 CGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT-AGATAGTAGATAGGGAC 371
|||||||| |||| ||| ||||||||| |||||| |||| | ||| || ||||| | |
Sbjct 134037 CGCTGATTTTGCCA-GCCTGTTCCCTTGCCTGTGGCTTCGTTGAGA-AGAAGATATGACC 133980
Query 372 AGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCT 431
||| |||||| ||| || ||||||||| |||||| ||||||| ||||||||| ||||
Sbjct 133979 GGTGTGAATCTGGTTCATACATTCATGCATGTCACTTATTAGATTCCGAGGCATT-GGCT 133921
Query 432 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACT 491
||||| | || ||||||||| ||||| ||| || | |||||| |||||
Sbjct 133920 ACCTTGGGTGAATCATAGTTATCCCCGCAGTT--CCAACTCTTGGT--------TTCACA 133871
Query 492 TTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
|| |||| | ||||||||| |||| |||||||| ||| ||||||||
Sbjct 133870 AATCCACTCAGCGAACTGGGCAGGTATCATGTTGCGTCAGCAT-ACTTTCTG 133820
Score = 102 bits (112), Expect = 3e-19
Identities = 111/144 (77%), Gaps = 10/144 (7%)
Strand=Plus/Minus
Query 341 GCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCG 400
|||||| | ||||| |||||||||| | || |||| ||||| | ||||||| |
Sbjct 169188 GCTGTG-TCTCGCTGGATAGTAGATGGTAACTGTGGAAATCT----ATTCCATTC----G 169138
Query 401 CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC 460
||||||||| | |||||||| | | ||||||||||| || ||||| ||| || |||||
Sbjct 169137 CGTCACTAACTTGATGACGAAGAAATTGGCTACCTTGTGATGGTCATTGTTCCT-CCGCC 169079
Query 461 GTTTACCCGCGCTTGGTTGAATTT 484
| | ||| |||| |||||||||||
Sbjct 169078 GGTCACCTGCGCCTGGTTGAATTT 169055
>seq68
Length=1116518
Score = 116 bits (128), Expect = 1e-23
Identities = 152/206 (74%), Gaps = 6/206 (3%)
Strand=Plus/Minus
Query 333 TTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCA 392
||||||||||| |||||||| || |||||| ||||||| || ||| ||| |||
Sbjct 865092 TTCCCTTGGCTTCGGTTTCGCAGAATTGTAGATGGGGACAGCGG---TCTTTGTAACCCA 865036
Query 393 TTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTA 452
|||| ||||||||| ||||| | |||| ||||| || ||| ||| |||||| ||
Sbjct 865035 TTCAATTGCGTCACTACTTAGACCATGAGG-ATTTGCCTGTCTTGAGAAAGTCATGCCTA 864977
Query 453 CTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGC 512
|| || ||| || | || | || |||| | || | || ||||||| ||||||||| |
Sbjct 864976 CTTCCACCGAATATCTGCAATCGGCCGAATCT-TTGAATTAGACATTCGGAGCACTGGAC 864918
Query 513 AGAAATCACATTGCGTCAACATCACT 538
||||| || |||| |||| ||||||
Sbjct 864917 AGAAA-CAGCTTGCCTCAAAATCACT 864893
>seq69
Length=221780
Score = 113 bits (124), Expect = 1e-22
Identities = 115/147 (78%), Gaps = 10/147 (7%)
Strand=Plus/Plus
Query 341 GCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCG 400
|||||| | ||||| |||||||||| | || |||| ||||| | ||||||| |
Sbjct 5618 GCTGTG-TCTCGCTGGATAGTAGATGGTAACTGTGGAAATCT----ATTCCATTC----G 5668
Query 401 CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC 460
||||||||| |||||||||||| | ||||||||||| || |||||| ||| || |||||
Sbjct 5669 CGTCACTAACTAGATGACGAGGAAATTGGCTACCTTGTGATAGTCATTGTTCCT-CCGCC 5727
Query 461 GTTTACCCGCGCTTGGTTGAATTTCTT 487
| | || |||| ||||||||||| ||
Sbjct 5728 GGTCTCCTGCGCCTGGTTGAATTTATT 5754
>seq81
Length=138817
Score = 89.7 bits (98), Expect = 2e-15
Identities = 110/147 (75%), Gaps = 10/147 (7%)
Strand=Plus/Plus
Query 341 GCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCG 400
|||||| | ||||| |||||||||| | || |||| ||||| | ||||||| |
Sbjct 6801 GCTGTG-TCTCGCTGGATAGTAGATGGTAACTGTGGAAATCT----ATTCCATTC----G 6851
Query 401 CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC 460
||||||| | | |||||||| | | | ||||||||| || | ||| ||| |||| |||
Sbjct 6852 CGTCACTTACTTGATGACGAAGAAATAGGCTACCTTGTGATGGACATTGTTCCTCC-GCC 6910
Query 461 GTTTACCCGCGCTTGGTTGAATTTCTT 487
| | ||| |||| ||||||||||| ||
Sbjct 6911 GGTCACCTGCGCCTGGTTGAATTTATT 6937
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635197481792
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |