Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq5 136 3e-27 >seq5 Length=1013952 Score = 136 bits (150), Expect = 3e-27 Identities = 393/599 (66%), Gaps = 7/599 (1%) Strand=Plus/Plus Query 61057 TTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCT 61116 || || |||||||| || | || | || || |||| |||||||| ||||| |||||| Sbjct 647130 TTTGTTTTGTTCCCAATTAAATACCATGAAATCTGGCAAATGTACAAGAAGGCTGAAGCT 647189 Query 61117 TCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTTA 61176 || |||||||| | || || | ||||| || || || | |||||||| | | Sbjct 647190 TCTTTCTGGACTGCAGAAGAAATTGATTTATCAAAGGATACTCATGACTGGAACAACAGA 647249 Query 61177 TCGAGCG---GTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGAC 61233 | | | | ||| | ||||||| | || || || |||||||| || || ||| Sbjct 647250 TTAAATGAAAGCGAAAGATTTTTCATTTCAAGAGTTTTAGCTTTCTTTGCAGCCTCCGAC 647309 Query 61234 GGTATCGTCAATGAGAATTTA-TTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGC 61292 ||||| || || ||||| || ||| || ||| || | || | ||| | | || || Sbjct 647310 GGTATTGTTAACGAGAACTTGGTTGAAAACTTTTCTGCCGAAG-TCCAAATTCCAGAAGC 647368 Query 61293 GCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGT 61352 ||||||||||| |||||||| ||||| || ||||||| || | ||| | Sbjct 647369 CAAGTGTTTCTACGGTTTCCAGATCATGATGGAAAACATCCACTCTGAAACTTACTCATT 647428 Query 61353 TCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGA 61412 | ||||| || || | | ||| | ||| ||| || |||||||| || || Sbjct 647429 ATTGATCGACACCTATGTTAAGGATCCAAAGGAGGCTGACTTCTTATTCAATGCTATTGA 647488 Query 61413 GACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGT-ACAA 61471 ||| || || | ||| || || || |||||| | | ||||| | || | || Sbjct 647489 GACTATTCCTTGCATCAAGGAAAAGGCTGACTGGGCCATGAGATGGATGAACAACGAAAA 647548 Query 61472 CGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTG 61531 |||| ||| | ||| |||| | || ||||| | ||||| ||| | || ||| || Sbjct 647549 TGGCTT-ATTCGCCGAAAGATTAGTTGCCTTTGCTGCTGTCGAAGGTATCTTCTTCTCTG 647607 Query 61532 GATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCA 61591 | || ||||| | |||||||||||||| || | || || ||||| || | || ||| Sbjct 647608 GTTCATTTGCTTCTATCTTTTGGTTGAAAAAGAGAGGCCTAATGCCGGGCTTAACTTTCT 647667 Query 61592 GCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTC 61650 ||||| ||||| | | || || || | || |||||||||| ||| ||||| Sbjct 647668 CTAATGAATTGATTTGTAGAGATGAAGGTTTACACACTGATTTTGCTTGTTTATTATTC 647726 Score = 84.2 bits (92), Expect = 2e-11 Identities = 202/306 (66%), Gaps = 0/306 (0%) Strand=Plus/Plus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 |||||| | ||| || ||||| | ||| ||| ||||| | |||| ||| || | Sbjct 377965 CATAAACAAATCTGGAATCCATAAGGCCGGGAATAGATCTCTAGCTCTGATCTCTTCCTT 378024 Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459 |||||||| || | | |||| ||| |||||||| || | |||||||||||| | ||| Sbjct 378025 ACCGTGATTCTTTCTAATATCGATGAAATCAAAGATATCAGAATGCCATGGTTCAATGTA 378084 Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTT 66519 | ||||| | || | |||| || || ||||| || || | || ||||| Sbjct 378085 TAAAGCGAAAGCACCTGGTCTTTTGTTACCCCCCTGGTCAACATATCTTGCAGTGTTGTT 378144 Query 66520 GAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGA 66579 ||| || | | ||| || | || |||||||| | ||||| || ||| | || || Sbjct 378145 GAAAACTCTAATCATTGGAATGATACCGTTAGAAGTACCATTAGTACCGGCAATATATGA 378204 Query 66580 TCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGC 66639 || | | || | |||| | | |||||||||||| || ||||| || || Sbjct 378205 ACCAGTAGATCTAATGTTATGAATGTGTAAACCAATACCACCAGCAGTCTTGGAAATCAA 378264 Query 66640 AGCACA 66645 |||||| Sbjct 378265 AGCACA 378270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567844948480